Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03764 ATGGGTGCTTCACATTCGATCTCTGAAAATTCAATCTATGAATTCACAGTTCAGGATGCAAAGGGAAGAGATGTGAATCTCAGCAATTACAAGGGAAAAGTTCTTATTGTAGTTAACGTTGCTTCAAAATGTGGATTTACCAATGTCAATTATACCCAGTTAACTGAGCTTTACAACAAATACAAGGATAAAGGACTTGAGGTATTGGCTTTTCCATGCAATCAGTTTTTGAACCAAGAGCCTGGGAGTAGCCACGATGCGGAGGAATTTGCATGTACAAGATTCAAAGCTGAGTATCCAATTTTTGGAAAGATACGTGTGAATGGATCCGAAACAACACCCCTCTTCAAATTCCTTAAAGAAAAGAAATCTGGTTTTCTGGGAACAGCTAGGATAAAGTGGAATTTCACCAAGTTTTTGATCGGCAGGGACGGGCAGGTCCTCCAGCGTTATGGTCCAACCACCTCACCATTTTCCTTTGAAAATGACATCAAGAAGGCCTTGGGATTGGCTTGA 516 0.407 MGASHSISENSIYEFTVQDAKGRDVNLSNYKGKVLIVVNVASKCGFTNVNYTQLTELYNKYKDKGLEVLAFPCNQFLNQEPGSSHDAEEFACTRFKAEYPIFGKIRVNGSETTPLFKFLKEKKSGFLGTARIKWNFTKFLIGRDGQVLQRYGPTTSPFSFENDIKKALGLA 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03764 171 Gene3D Glutaredoxin 6 170 - -
Trre13g03764 171 Pfam Glutathione peroxidase 12 120 IPR000889 GO:0004602|GO:0006979
Trre13g03764 171 ProSiteProfiles Glutathione peroxidase profile. 2 171 IPR000889 GO:0004602|GO:0006979
Trre13g03764 171 PANTHER GLUTATHIONE PEROXIDASE 6 168 IPR000889 GO:0004602|GO:0006979
Trre13g03764 171 ProSitePatterns Glutathione peroxidases active site. 32 47 IPR029759 -
Trre13g03764 171 CDD GSH_Peroxidase 11 164 IPR000889 GO:0004602|GO:0006979
Trre13g03764 171 SUPERFAMILY Thioredoxin-like 11 168 IPR036249 -
Trre13g03764 171 FunFam Glutathione peroxidase 3 170 - -
Trre13g03764 171 PRINTS Glutathione peroxidase family signature 66 82 IPR000889 GO:0004602|GO:0006979
Trre13g03764 171 PRINTS Glutathione peroxidase family signature 132 141 IPR000889 GO:0004602|GO:0006979
Trre13g03764 171 PRINTS Glutathione peroxidase family signature 30 47 IPR000889 GO:0004602|GO:0006979
Trre13g03764 171 PIRSF Glutathion_perox 1 170 IPR000889 GO:0004602|GO:0006979
Trre13g03764 171 ProSitePatterns Glutathione peroxidases signature 2. 69 76 IPR029760 -
Trre13g03764 171 ProSiteProfiles Thioredoxin domain profile. 6 169 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03764 Trre-Chr13 45729705 45733335 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03764 - K00432 mtr:25499098 298.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03764 13 45729705 45733335 Trre13g03764 13 45729705 45733335 ECH
Trre13g03764 13 45729705 45733335 Trre1g03083 1 26518423 26526104 PCT