Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03006 ATGGGTGAACAATCACCAAATCAAAACTTCACTACAACTATTCCATCTCTATTTGGTTCACCAAACTATAGAGATTTTCATTTCACTTCTAAAAAATCTCTCTATGGAAATGAAGCTTTGATAAGTCCAACATCAATTCTTGACACAAAAGCTTTAAGTCATTTTGAGAATCCTTTCTCAATTAACAATAGGAACAAAGTTTGTAGTAACTCAAGAGACAAAGTAGATTCAAAAATCATTGGAATTGGTCTTGTTGGTGTTCTAAAAGATGAAACTTTTCATCAAAATTCTGAAAAACTAGGAAATAAAAAAGTTCTGTTTGGAACTGAACTTAGAGTGAAAATTCCTCCCTTGCCCACTTCCACGTTTGAGTCAAAAAATGATTTTTTTGGTGGCAAAATCAATGATTCACAAAAGGGTGTTCTTAGTTTGAGTGAAATGGAGCTTTCTGAAGAATACACATGTGTGAAATCACATGGACCAAATCCAAAAACAACTCATATATTTGATAATTGTGTTGTGGAAAGTTACTGTTCTGTCCCTAATAGTCCTCATTATTTTTCACTGAATTTTCTTAGCTTTTGTCACACTTGCAAAAATCATCTTGAGCATACAAAAGACATCTTCATTTACAGAGGTGAAAAAGCTTTTTGCAGTCAAGAATGTCGACACAAAGAGATGGTGTTAGATGGAGCAGAAAATTAA 705 0.3291 MGEQSPNQNFTTTIPSLFGSPNYRDFHFTSKKSLYGNEALISPTSILDTKALSHFENPFSINNRNKVCSNSRDKVDSKIIGIGLVGVLKDETFHQNSEKLGNKKVLFGTELRVKIPPLPTSTFESKNDFFGGKINDSQKGVLSLSEMELSEEYTCVKSHGPNPKTTHIFDNCVVESYCSVPNSPHYFSLNFLSFCHTCKNHLEHTKDIFIYRGEKAFCSQECRHKEMVLDGAEN 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03006 234 Pfam zinc-finger of the FCS-type, C2-C2 188 231 IPR007650 -
Trre1g03006 234 ProSiteProfiles Zinc finger FLZ-type profile. 190 234 IPR007650 -
Trre1g03006 234 PANTHER FCS-LIKE ZINC FINGER 8 6 233 IPR044593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03006 Trre-Chr1 25820403 25821226 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03006 - - mtr:11434150 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g03006 1 25820403 25821226 Trre1g03006 1 25820403 25821226 ECH
Trre13g03817 13 46319017 46320176 Trre1g03006 1 25820403 25821226 PCT