Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03817 ATGATGCTAAGGAATAGATCAAGAGCAGTGACCAAGCCAAATTTAATGGCTGATCATAGTTCTCAACAATCTTCAAATAATCAAAATTGTGTTAAAAAAACTATCCCTTCTTTATTTGGTTCACCAAAATTTATTAGAGATTTCACCACCTTCAATAATAGTACTCTCTTAGAAGTTTTGAAAAGTCCAACTTCAATTCTTGACACTAAAATGTTATCCCCTTATGGAAATCCATTTTTGTATGACAACAAAATCCAAAATAACAAAACCTTCTCCTCATCAAGAGCCATTGGTCTAGCTCTTATAGGTAACCTTAAAGATGATACAATTGATGAGAATAATTATGTTGAACAAAACAAAGGAAATGTTTTGTTTGGAACACAACTTAGAGTTAAAATTCCATCTTTACCCTCTCCTATATTTTCTCCATTTGAGTCTCAAACTAAAACCAAAGACCCACCAAATTCAAGAGATTATACAAAAGAATCTCTATCTTTGAGTGAGATGGAACTTAGTGAGGAATATACATGTGTGATATCTCATGGTCCTAATCCAAGAACTACTCATATATTCAATAATTGCATTGTGGAAGAAAATTATTGTTCTTTGCCACAAAACAACTCTAACTCTTCTTATGGGAATTTTCTTGGAATATGTCACACTTGCAAGAAACATCTTGAGCATACAAAGGACATTTTTATTTATAGAGGAGAGAAAGCTTTCTGCACTAGAGAATGCAGGCACAAAGAAATGTTGTTAGATGGTGTAGAAAGTTTAGAAGACAATGAAAGTACTAATTAA 801 0.3221 MMLRNRSRAVTKPNLMADHSSQQSSNNQNCVKKTIPSLFGSPKFIRDFTTFNNSTLLEVLKSPTSILDTKMLSPYGNPFLYDNKIQNNKTFSSSRAIGLALIGNLKDDTIDENNYVEQNKGNVLFGTQLRVKIPSLPSPIFSPFESQTKTKDPPNSRDYTKESLSLSEMELSEEYTCVISHGPNPRTTHIFNNCIVEENYCSLPQNNSNSSYGNFLGICHTCKKHLEHTKDIFIYRGEKAFCTRECRHKEMLLDGVESLEDNESTN 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03817 266 ProSiteProfiles Zinc finger FLZ-type profile. 214 258 IPR007650 -
Trre13g03817 266 MobiDBLite consensus disorder prediction 142 161 - -
Trre13g03817 266 PANTHER FCS-LIKE ZINC FINGER 8 3 257 IPR044593 -
Trre13g03817 266 MobiDBLite consensus disorder prediction 14 28 - -
Trre13g03817 266 MobiDBLite consensus disorder prediction 1 28 - -
Trre13g03817 266 Pfam zinc-finger of the FCS-type, C2-C2 209 254 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03817 Trre-Chr13 46319017 46320176 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03817 - - gmx:100811607 271.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03817 13 46319017 46320176 Trre13g03817 13 46319017 46320176 ECH
Trre13g03817 13 46319017 46320176 Trre1g03006 1 25820403 25821226 PCT