Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03004 ATGGGGAGTTCATCAAATCCATCATCTTCATGTTGCTCACAACTTTCAACTGTAGTTCAATCTTCTCCACAGTGTCTTTGCTCCTTGCTTAATGGTGGTGGTTCATCTTTTGGAATCACCATAAATCAAACTCTTGCTCTGTCTCTCCCTTCTGCTTGTAAAGTTCAAACTCCACCTGTTAGTCAGTGCAAAGGTGGCAATGGACCAATATCTCCTTCAAGTTCAAGTTCTCCAGTGGGCTCACCTGTTGAATCACCAACTGATTCTTCAACTGAATCACCTGAAGGCTCAATAACACCTTCTGCTTCAAACTTTCCCTCAGGAGAAGGAGGTGCAAAAAGTGTTCCATCAACAGACGGTGGCTCATCTGATGGAAGTACTATTAAAGTCTCATTCAACTTTGTTCTTTCTCTTGTTGCCTTTGTGTTTTGTGTTGTCACAAAGTTTTGA 450 0.4178 MGSSSNPSSSCCSQLSTVVQSSPQCLCSLLNGGGSSFGITINQTLALSLPSACKVQTPPVSQCKGGNGPISPSSSSSPVGSPVESPTDSSTESPEGSITPSASNFPSGEGGAKSVPSTDGGSSDGSTIKVSFNFVLSLVAFVFCVVTKF 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03004 149 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 3 120 IPR043325 -
Trre1g03004 149 Pfam Probable lipid transfer 5 63 IPR016140 -
Trre1g03004 149 MobiDBLite consensus disorder prediction 60 122 - -
Trre1g03004 149 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 2 64 IPR036312 -
Trre1g03004 149 Gene3D - 1 63 IPR036312 -
Trre1g03004 149 CDD AAI_LTSS 14 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03004 Trre-Chr1 25803817 25805021 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g03004 2 141 Lipid Metabolism Gene Families AT3G22600 47.222 1.28e-27 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03004 - - gmx:100306151 177.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g03004 1 25803817 25805021 Trre1g03004 1 25803817 25805021 ECH
Trre1g03004 1 25803817 25805021 Trre13g03822 13 46378923 46380075 PCT