Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02991 ATGGCGAATCGATCTCACGCAGATTCTAGGAGAATGTATTCTTGGTGGTGGGATAGCCACATAAGTCCTAAGAATTCAAAATGGCTCCAAGAAAATCTTACAGATATGGATGTTAAGGTGAAGCAAATGATTAAGCTCATTGAAGAAGATGCAGATTCCTTTGCCCGGAGAGCGGAAATGTACTATAAAAAACGCCCGGAGCTTATGAAAATGGTTGAAGAGTTTTATAGGGCATACCGAGCATTGGCCGAGAGATATGATCATGCAACTGGAGTTATTCGCCATGCCCATCGGACCATGTCTGAAGCATTTCCTAATCAAAATCCTATGATGATCACGGATGATTTTTCTGCGGTTCCGCCAATGGAGACTGAGCCACGCACTCCAGAAACACGCCACCCTTCACGTGCATTTCTTGACTCAGATGAATCAGAAAAGGATGCTCATGTTATCAAAAGAAATGGAGCGCATAGTGAAGAACCTAATTCTTCTTTGAACAAGACAGGTTTAAGACAGCTCAACGATCTCTTCATCCCTGGAGAGCATGCAAAGTTTGCAGAAGGACATGCTAGAAGGGGGCTCAATTTTTTAGAGACACAGGAGAGTAGCGAGCAAAACAATGGAAGCCATGGTACTAAGGATCAAGTCTTGTCCGAGTCCGAACGGGTGACAAAAGCTGAAGCAGAAATTTTGGCCTTGAAACAAGCCCTTGCCAAATTAGAAGATGAAAAGGAAGCTGGCTTGCTTCAGTATCAGCAGAGTGTGGAGAAATTGTCTAATCTTGAATCAGAAGTATCTTCTGCACAAGAGAATTCTCAAAGACTCGATGAACGAGCAAGCAAAGCAGAAGCCGAAGTTCAAGATTTGAAGGAAGCGGTAATCAAATTACAGGCTGAAAGGGAAGCTAATCTTCTCCAGTATCAGGAATGCTTGGAGAAAATAACTGATCTGGAGAAAAATATTTCTTTTGCTCTGAAGGATGCTGGAGAATTTAACGAACGTGCTACTAGAGCTGAAACTGAAGTTGAGTCGTTGAAGCAGGACCTTGCTCGAGTAGAAGCTGAAAAGGAAGCCGTCCTTGTTGAATATAAACAGTGCTTGGAGACATTATCGAAACTGGAGGAGAGATTAAAAGAATCTGAGGAGAACGCTAGAAGGATTAATGAGCAAGCTAATATAGCTGAAAATGAAATCAAGGTTTTGAAGTTGGAAGTTACTAAACTTAATGAAGAGAAGGAAGACGGGGCTCTCCGGTATCAGCAATGCCTGGAGATAATTTCCAGTTTGGAATATAAACTCTCTTGTGCTGAAGAGGAGGTGCGTAGGTTAAATTCTAAAATAGACGAAGAGGCTGAAAAGTTACATAGTTCCGAAGAGAAGTGTGTTCTTTTGGAAACATCAAATCACGCTCTACAATCTGAATTACAGTCTTTGGTACAGAAGATGGGGTCTCAAAGTGAAGAACTTAATGAGAAGCAGAATGAATTGGGTAAACTTTGGAGTTGCATGCAAGAGGAGAGACTGCGATTCATTGAGGCTGAAACCGCTTTCCAAACGCTTCAGCATTTGCATTCTCAATCTCAGGAAGAGCTTAGATCTCTTGCTTCTGACTTTCACAGTAAAGTGGAAATACTCGGGAATGTGGAATCACGTAAGCAGGCTCTAGAGGATGAAGTGCATAGAGTGAATGAGGAAAACAAAATTCTAAATGAGCTCAAAATTTCTTCATCTTTGTCTATAAAAACTTTGCAGGATGAGATATTGAATTTGAAAGAGACAATAGAGAAACTTGAACAGGAGGTTGAGCTGCGACTTAATGAAAGAAACGCTCTTCAGCAAGAAATTTACTGTCTTAAACAGGAGCTTAATGATATGAATAAAAAACATGATGCTATAATGGAGGAGGTCAGGTCAGCTGACTTAGATCCTCAGTGCTTTGGCACATCTGTGAAAAATTTGCAAGAAGAGAACTCAAAGCTGAAGGAGACATGTGAGGCCGACAAAGATGAAAAAGCAGCTCTTTTGGTAAAATTGGAAATCATGGAGAAACTTTTGGAGAAAAATTCTGTTTTAGAGAATTCAATTTCAGACTTGAATGCTGAATTGAATAGCGTCAGAGGAAAGGTAAATGTGTTGGAAGAAACATGCCAGTCGCTGCTTGTGGAGAAATCAGCTCTTGCTGCCGAGAAGGCCACCTTGTTTTCTGAATTACAAGTAACAACTGAAAAGCTGGAGAAGCTCACAGAAAATAACAACCTTTTGGAAAACTCACTATTTGATGTCAATGCTGAACTCGTTGGATTAAGAGGAAAGTCCAAGATCTTAGAAGACACATGCCAGTTACTTGAACATGAGAAATCCGGTATCTTTTCGGAGAAAGAAGCCTTATTTTCACAGTTGAACACAACACACCAAATGCTGAAAGATCTTGAAAAACAACATAGTGAATTGGAATTAATGCATTCGGAGCTAAAAGGAGAAAGGGAGTCTGCACTTAAAAAGGTGGAAGAGCTATTGGTTTCTCTATATTCCCAAAGGGAAGAACATTGCAGAGTTGTGAAGTTGAATGAAGATGAACTGGCGAACAAGGAATTACAAATTCATTCTATGCAAGAAGATGCAAAGTGCCGGAAAGAAGAATTCAATGAGGAACTAGAAAGAGCTATAAATTCTCAAATTGAAATTTTCATCTTGCAGAAGTTTATCCAAGATTTGGAGAAAAAGAACTTTTCCCTTCTAGTCGAGTGCCAGAGTCTTTTGGAAGCGTCCAAAATGTCTGATAGAATGATTTCTAAATTGGAGGCTGAAAATATTCAAAAGCAAGATGATGTAGATTCTTTGTCTGAGAAAATTAAAATACTAAGGATTGGGCTGTTTCAGGTGTTGAAGACTCTTGACATTAACGGCAAGAATTTCTTTGAAGATATGCTTGATGAAGACCAAACTCTTCTGAACCATATACATGGAAAACTTGAGGAGAGACAAAAGTCTTTTGACACAATTTTCAACGAAAGCCACCACATGGCCGTTGAGAATTCAGTTCTGATTACATTTATTGAGCAGTTGAAACTACAGGTAGAAAATCTCGTGACAGAAAAAGGTGCTCTTGATGAAGAGTCCAGGATACAGTCAGAGCAGTTCAAGGCATTGCAAATAGAGTTCCAAAAGGTATTGGAAAATAATCAGGAGTTGAAGTTGACAATAAGCAATGGAGAAAAGAGAATTGAAGGAATGGCATGTGACATAGAGAATCTACGCAGAGAGCTATCAGACTTTGAAAAGAGCCACAGAAGCTTAAAGGAAGAAAGCTGCACGATACTTGAAGAGAAAAACTCCTTAATGGGAAGATTTAAAGATCTTGGTGAGGAGAAGGGTAACTTGGAAGAAGAAATTTGTGTCCTGTACCATGAGAGATTAGTTCAATCTAATATTTCTGTGGTTTACGAGAATATTATCTTTGAAAAACTCCTGGAACTTAAACAGCTTGGTCAAGAACTTGATAAGCTCTCTTCAGAAAATAATAACCTTGAGGCGAGATTGAAAACAATGGCACACAAATTAGAAAATGCAGAAATGGAAAATTCTCATCTTAAAGAGTTATTTGTAAAGTCAAATGTTGAATTGAATTTAGTTGAATCTGTCAATGATCAATTGACTTGTCAGATTACTAATGAAAGGGAAATGTTGAGTCAAAAGGAAAAAGTGCTTTTGGAAACAGCCAAGACGTTTCATGCTTTGCACACTGAGAAAAAAGAATTGCAAAGAACGGCGGAAGATCTGAAGGTTAGATATGAGGATGCCAAGGGGAAACTTGAAGAGCAAGCTAATAAAATTTTCAAGTTGTCCTCAGACAAGGATCGTCAAAATGAAGAGCTTGGATGCCTTTACGAAGCGAACCAGAAATTGGAGTCTGAAATGAAGTGCATACACCAAGAACTTGAAGAAACTAAACTGAAGGAAAAGAAGCTAAGTCATGAAGTGCATGAACGGATGAATGAGATTGAACAATGGGAAACTCAGGCTGCAGCACTCTATGCTGAACTGCAGATTTCTGTTGTCCATGAAACACTATTTGAAGGGAAGGCTAGTGAGCTAGCTGATACATGCGAGGATCTTGAGCACATAAACAACTCGAAAGACATGGAAAGTGAACAGCTGAAAGAATTAGTTAGCAAGTTGCAAGGTGAAAACGGGAGACTCTATGGTCAATTAGCTGCTTATGTCCCAGCTATCGGTGCTTTGAATGATTGTGTAACATCTCTGGAGATGCAGACTCTTGGACATGCAAAACATTATAACTATGAAAAACCGGAGGTTAAAAATTTGGTGAATCACCAATACATTGAAAATGGTCAACATATAGATGAAGATCAGACTGTTACGGCACCGGATCCACTCCTTGACTTCCAAGACCTGCAGAGGAGGATCAATGAAATTTCAATGGCATTTAAGAATTCAAATGGAAGTTTCAAACCAGAGGATGAAATGAGAGAGATTCAAGAAGCAAAGGAGAATGAACAGAAGATAGGGAAGTCAAGGCCAGATAATCCTGTAAGTGAGATTGAAGTACTGCCAAAAGACATCATGCTTGATCAAATATCTGAATGTTCCTCATATGGAGTAAGTAGAGGAGGAACTCTTGAATCTGATGATCATATGCTTGAGTTATGGGAAACATCTGATAAGACACAGAAGATGGCGGCAGAACCGGTAGAAGATCATCATCAAAGAGGAGCAGCCAAGGAAACCTACAACAAACATCCTTCTGGAGATTACTTGGTGGAAAAGGAATTGGGCGTGGACAAGTTAGAGATCTCGAGAAGATTGTCACGGCCCCGTGAAGAAGGCAATAAGAGCAAGGTTTTGGAAAGACTTGATTCTGATGCACAGAAGTTAACAAACCTTCAAATAACCATACAAGATTTGATGAAGAAAATGGCAAGTACTGAGAAGAGCACAAAGGGGAAAGGTTCCGAGTATGATACGGTTAAAGAGCAGCTTGAAGCTTCTCAGGAAACCGTCACAAAGTTGTTTGATGCAAACCGCAAGTTGATGAAGAATGTAGAAGAGGGTGCATTGTCTTCATCTGGGACGGCTGCATCAGCGTCAGATGAGGTTGGAAGTGTCAGCAGGAGGAGAGTTTCAGAACAGGCGCAAAGAGGATCTGAAAAAATAGGACAACTTCAGTTGGAGGTGCAAAGACTGCAGTTTCTTCTTTTGAAACTCAATGAAAGCAAAGATAAAACAAGAATGGATGGTCGAAGTCCGAGAGTACGTCTGCGGGATTATCTTTATGGTGCGACAAAAACCAACCACCAAAAGAAGAAGAAAACACCTTTTTGTGCATGTGTAAGACCACCCACCAAGGGAGATTGA 5376 0.399 MANRSHADSRRMYSWWWDSHISPKNSKWLQENLTDMDVKVKQMIKLIEEDADSFARRAEMYYKKRPELMKMVEEFYRAYRALAERYDHATGVIRHAHRTMSEAFPNQNPMMITDDFSAVPPMETEPRTPETRHPSRAFLDSDESEKDAHVIKRNGAHSEEPNSSLNKTGLRQLNDLFIPGEHAKFAEGHARRGLNFLETQESSEQNNGSHGTKDQVLSESERVTKAEAEILALKQALAKLEDEKEAGLLQYQQSVEKLSNLESEVSSAQENSQRLDERASKAEAEVQDLKEAVIKLQAEREANLLQYQECLEKITDLEKNISFALKDAGEFNERATRAETEVESLKQDLARVEAEKEAVLVEYKQCLETLSKLEERLKESEENARRINEQANIAENEIKVLKLEVTKLNEEKEDGALRYQQCLEIISSLEYKLSCAEEEVRRLNSKIDEEAEKLHSSEEKCVLLETSNHALQSELQSLVQKMGSQSEELNEKQNELGKLWSCMQEERLRFIEAETAFQTLQHLHSQSQEELRSLASDFHSKVEILGNVESRKQALEDEVHRVNEENKILNELKISSSLSIKTLQDEILNLKETIEKLEQEVELRLNERNALQQEIYCLKQELNDMNKKHDAIMEEVRSADLDPQCFGTSVKNLQEENSKLKETCEADKDEKAALLVKLEIMEKLLEKNSVLENSISDLNAELNSVRGKVNVLEETCQSLLVEKSALAAEKATLFSELQVTTEKLEKLTENNNLLENSLFDVNAELVGLRGKSKILEDTCQLLEHEKSGIFSEKEALFSQLNTTHQMLKDLEKQHSELELMHSELKGERESALKKVEELLVSLYSQREEHCRVVKLNEDELANKELQIHSMQEDAKCRKEEFNEELERAINSQIEIFILQKFIQDLEKKNFSLLVECQSLLEASKMSDRMISKLEAENIQKQDDVDSLSEKIKILRIGLFQVLKTLDINGKNFFEDMLDEDQTLLNHIHGKLEERQKSFDTIFNESHHMAVENSVLITFIEQLKLQVENLVTEKGALDEESRIQSEQFKALQIEFQKVLENNQELKLTISNGEKRIEGMACDIENLRRELSDFEKSHRSLKEESCTILEEKNSLMGRFKDLGEEKGNLEEEICVLYHERLVQSNISVVYENIIFEKLLELKQLGQELDKLSSENNNLEARLKTMAHKLENAEMENSHLKELFVKSNVELNLVESVNDQLTCQITNEREMLSQKEKVLLETAKTFHALHTEKKELQRTAEDLKVRYEDAKGKLEEQANKIFKLSSDKDRQNEELGCLYEANQKLESEMKCIHQELEETKLKEKKLSHEVHERMNEIEQWETQAAALYAELQISVVHETLFEGKASELADTCEDLEHINNSKDMESEQLKELVSKLQGENGRLYGQLAAYVPAIGALNDCVTSLEMQTLGHAKHYNYEKPEVKNLVNHQYIENGQHIDEDQTVTAPDPLLDFQDLQRRINEISMAFKNSNGSFKPEDEMREIQEAKENEQKIGKSRPDNPVSEIEVLPKDIMLDQISECSSYGVSRGGTLESDDHMLELWETSDKTQKMAAEPVEDHHQRGAAKETYNKHPSGDYLVEKELGVDKLEISRRLSRPREEGNKSKVLERLDSDAQKLTNLQITIQDLMKKMASTEKSTKGKGSEYDTVKEQLEASQETVTKLFDANRKLMKNVEEGALSSSGTAASASDEVGSVSRRRVSEQAQRGSEKIGQLQLEVQRLQFLLLKLNESKDKTRMDGRSPRVRLRDYLYGATKTNHQKKKKTPFCACVRPPTKGD 1791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02991 1791 Coils Coil 426 460 - -
Trre1g02991 1791 Coils Coil 1019 1039 - -
Trre1g02991 1791 Coils Coil 853 891 - -
Trre1g02991 1791 Coils Coil 1110 1130 - -
Trre1g02991 1791 PANTHER PROTEIN NETWORKED 4A 278 381 - -
Trre1g02991 1791 Coils Coil 681 715 - -
Trre1g02991 1791 Coils Coil 1632 1652 - -
Trre1g02991 1791 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Trre1g02991 1791 Coils Coil 223 299 - -
Trre1g02991 1791 Coils Coil 580 628 - -
Trre1g02991 1791 Coils Coil 1243 1319 - -
Trre1g02991 1791 Coils Coil 793 827 - -
Trre1g02991 1791 MobiDBLite consensus disorder prediction 199 220 - -
Trre1g02991 1791 Coils Coil 475 495 - -
Trre1g02991 1791 Coils Coil 1047 1102 - -
Trre1g02991 1791 Coils Coil 930 950 - -
Trre1g02991 1791 MobiDBLite consensus disorder prediction 121 167 - -
Trre1g02991 1791 Coils Coil 307 411 - -
Trre1g02991 1791 MobiDBLite consensus disorder prediction 199 214 - -
Trre1g02991 1791 Coils Coil 1159 1200 - -
Trre1g02991 1791 Coils Coil 650 670 - -
Trre1g02991 1791 Coils Coil 545 572 - -
Trre1g02991 1791 MobiDBLite consensus disorder prediction 126 156 - -
Trre1g02991 1791 Coils Coil 730 764 - -
Trre1g02991 1791 MobiDBLite consensus disorder prediction 1692 1721 - -
Trre1g02991 1791 SUPERFAMILY Tropomyosin 389 637 - -
Trre1g02991 1791 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02991 Trre-Chr1 25614357 25620529 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02991 - - lang:109335385 2256.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g02991 1 25614357 25620529 Trre1g02991 1 25614357 25620529 ECH
Trre13g03849 13 46643429 46649600 Trre1g02991 1 25614357 25620529 PCT