Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02985 ATGGAACCAAAGTTAACAATAAATTGTCATAGAAATGAGTTTCAGCTTCCAACAACAAACAATAATGGAACTAGTACTCGTTTACCAGAGAGTCCAAGAATACCAATGGAGTTTCTTTCAAGATCATGGAGTGCCTCTGCATTTGAAGTCTCTAAAGCTTTGTCACCTCAACCACCACTATCTCTTCCTTCTACCTTACCTTCTAATAATAAGACTAACTCTATTCCTGAAGAAACTATTACTACTCTCTCTCATGAATTCTCAACCATGTGTGGTAATCAATTCTCTTTTGCTTCTTCTGCTACTTCACAAATTGTCCTTGAACGTATCATGTCTCAGTCCACAAGAGAGGAAGTATCTCCATTAACATCAGGTAGATTGTCTCATAGCAGTGAACCATTGAATGGTGGTGGTTCATTAACAGGAACTGATAGTCCACCAATTTCTCCTTCTGATGAGTTTGATGATGTTGTTAAGTTTTTTCGAGCAAACAATTCGATACACCCTTTATTCAATGGTACAAGAGCTATGAGCACTGGAATTGGAAATGCAACACCTTGTTCTGGACCTAAAACAGTAGGAAGATGGTTGAAAGAAAGAAGAGAAAAAAAGAAAGAAGAAAACAGAAGCCATAATGCTCAAGTTCATGCTGCTATTTCTGTAGCGGCGGTTGCTTCCGCAGTTGCAGCCATCACTGCAGCAACAGCAGCATCATCTGCACCAAACAAAGACGAGAAAATGGCTCAAACTGATATGGCTGTTGCTTCTGCAGCAACACTAATTGCTGCTCAGTGTGTTGAAGCTGCTGAAGCAATGGGTGCTGAGAGAGAACATCTTGCTTCTGTTGTTAGTTCTGCTGTTAATGTTCGGTCTCACGATGATATTACGACTCTAACCGCCGCAGCTGCCACAGCTCTAAGGGGGGCAGCAACATTGAAAGCAAGAGCATTGAAAGAGATGTGGAATATTAGTGCAGTGACACCACTAGAGAAAAGCAAAGGAATTGGAATATGTGGTGGTAAAGCCAATAATAACAGTAGTTCTAGCACTAGTGATAGTGGTGGAGAAGTTATCAATGCAGATAATTTTCTAAGTGCTTGTAGCCAAGAGCTTCTTGCTAGAGGAACTGAATTACTCAAACGAACCCGCAAAGGTGATCTTCACTGGAAAATTGTTTCTGTTTATATACATCGAACCGGCCAGGTTATGCTGAAAATGAAAAGCAGACATGTTGCAGGAACAATAACAAAAAAGAAAAAGAATGTTGTGTTGGATGTGTGCGCGAATTTACCGGCATGGCCAGGAAGGCATCTTTTAGAAGACGGTGAAAAAAGAAGGTATTTTGGATTGAAGACAGAATCAAGAGGTTTAGTTGAGTTTGAATGTAGAAATCAAAGAGAATATGAATTGTGGACTCAAGGAGTTTCGAGGCTTCTCTCCATTGTTTCGCAGAGAAAAAACAGAAATCGAATCTAG 1476 0.4018 MEPKLTINCHRNEFQLPTTNNNGTSTRLPESPRIPMEFLSRSWSASAFEVSKALSPQPPLSLPSTLPSNNKTNSIPEETITTLSHEFSTMCGNQFSFASSATSQIVLERIMSQSTREEVSPLTSGRLSHSSEPLNGGGSLTGTDSPPISPSDEFDDVVKFFRANNSIHPLFNGTRAMSTGIGNATPCSGPKTVGRWLKERREKKKEENRSHNAQVHAAISVAAVASAVAAITAATAASSAPNKDEKMAQTDMAVASAATLIAAQCVEAAEAMGAEREHLASVVSSAVNVRSHDDITTLTAAAATALRGAATLKARALKEMWNISAVTPLEKSKGIGICGGKANNNSSSSTSDSGGEVINADNFLSACSQELLARGTELLKRTRKGDLHWKIVSVYIHRTGQVMLKMKSRHVAGTITKKKKNVVLDVCANLPAWPGRHLLEDGEKRRYFGLKTESRGLVEFECRNQREYELWTQGVSRLLSIVSQRKNRNRI 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02985 491 MobiDBLite consensus disorder prediction 113 148 - -
Trre1g02985 491 MobiDBLite consensus disorder prediction 113 151 - -
Trre1g02985 491 Pfam Auxin canalisation 29 331 IPR008546 -
Trre1g02985 491 Pfam Plant pleckstrin homology-like region 377 482 IPR013666 -
Trre1g02985 491 PANTHER EXPRESSED PROTEIN 22 483 IPR040269 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02985 Trre-Chr1 25521233 25525544 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02985 - - gmx:100782024 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g02985 1 25521233 25525544 Trre1g02985 1 25521233 25525544 ECH
Trre13g03853 13 46714264 46716274 Trre1g02985 1 25521233 25525544 PCT