Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02983 ATGTTTAGGAATCAGCCATACGGAAAATCCGATTTGGAGAGCGGCGCAAGGCCTCTTTATCCGATGATGCTTGAAAGCCCCGAACTCCGGTGGTCTTTCATCCGAAAAGTCTACGTCATCATCGCCATCCAGTTACTCGCCACCATCGCTGTCGGCGCCGTCGTTGTCTCCGTTCGTCCTATTTCCATCTTCTTTGCCACCACCGGCGCTGGATTGGCTCTTTACATCGTTCTCATCTTTGTTCCTTTTATCACGTTGTGCCCTCTTTACTATTATTATCAGAAGCATCCTGTTAATTATCTTCTCCTAGCGGTTTTCACGCTTTCTCTTTCCTTTGTTATTGGATTGAGTTGTGCTTTCACTAGCGAGAAAGTAATTCTGGAAGCTGTTATATTGACTGCTGTTGTGGTGATCGCTTTGACTCTTTACACATTTTGGGCTGCAAGTAGAGGCTATGATTTCAACTTTCTTGGCCCCTTCTTGTTCAGCGCTATACTAGTTCTTATGGTCTTTGGGCTTATTCAGGTTTTCTTTCCATTGGGCAAGTTATCTACTATGATCTATGGTTGCTTGGCAGCAATTATATTTTGTGGCTATATCCTATATGACACAGACAACCTGATCAAGAGATACTCCTACGACGAGTTCATTTGGGCTTCTGTCTCGTTGTATTTGGACATCATCAACCTTTTCCTGTCTCTGCTCACTATTTTCAGAGCTGCTGATAGTTAG 732 0.4385 MFRNQPYGKSDLESGARPLYPMMLESPELRWSFIRKVYVIIAIQLLATIAVGAVVVSVRPISIFFATTGAGLALYIVLIFVPFITLCPLYYYYQKHPVNYLLLAVFTLSLSFVIGLSCAFTSEKVILEAVILTAVVVIALTLYTFWAASRGYDFNFLGPFLFSAILVLMVFGLIQVFFPLGKLSTMIYGCLAAIIFCGYILYDTDNLIKRYSYDEFIWASVSLYLDIINLFLSLLTIFRAADS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02983 243 PANTHER BAX INHIBITOR-RELATED 22 240 IPR006214 -
Trre1g02983 243 Pfam Inhibitor of apoptosis-promoting Bax1 32 238 IPR006214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02983 Trre-Chr1 25514808 25516479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02983 4 242 Miscellaneous Gene Families AT1G03070 76.132 2.76e-136 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02983 K24205 - gmx:100527528 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g02983 1 25514808 25516479 Trre1g02983 1 25514808 25516479 ECH
Trre13g03859 13 46782716 46784385 Trre1g02983 1 25514808 25516479 PCT