Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03859 ATGTCTGGAAAAAATGATATTGAGAGTGGAGAAAGAACCCTTTACCCTATGATGAATGAAAGCCCTGAATTAAGATGGTCTTTCATACGTAAAGTTTACACTATTATCACCTTTCAGTTACTTCTCACCATTGCTGTTGCTTCCGTCGTTGTTTTTGTTCATCCCGTAGCTAATTTCCTCTCCAAATCCATACCAGGCTTTTTTCTTTACTTCTTCATTAGCTTAATTCTTGCCATAATAACATTATGTCTGCTATGTTGTTATCATCAGAAGCATCCTCTCAATTACTTTCTCCTCCTGATTTTCACTGTCTCTATGGCTTTTCCAGTTGGAATGACTTGTTCTTATGCTCATGGGAAAGTAATTCTAGAATCTATAATATTGACTGCTGCGGTGGTATTTAGCTTGACTCTCTACACATTTTGGGCCGTAAAAAGAGGCCGTGATTTCAGCTTTTTAGGCCCATTCTTGTTCGGAGCTCTGATAGTTCTTATCCTCTTTGGCGTCATTCAGATTCTGTTTCCATTGGGAAAGTTGTCACATATGATCTATGGCTGTCTTGGAGCTATTATATTTTGTGGCTACATTGTATATGACACAAACAACCTTATCAAGAAATACTCCTATGATGAGTTCATCTGGGCTTCTGTCTCCTTGTATCTAGATGTCATCAACCTCTTCATCTCTCTGGTTACTCTTTTTAGTGCTGCGGATTGA 717 0.3835 MSGKNDIESGERTLYPMMNESPELRWSFIRKVYTIITFQLLLTIAVASVVVFVHPVANFLSKSIPGFFLYFFISLILAIITLCLLCCYHQKHPLNYFLLLIFTVSMAFPVGMTCSYAHGKVILESIILTAAVVFSLTLYTFWAVKRGRDFSFLGPFLFGALIVLILFGVIQILFPLGKLSHMIYGCLGAIIFCGYIVYDTNNLIKKYSYDEFIWASVSLYLDVINLFISLVTLFSAAD 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03859 238 PANTHER BAX INHIBITOR-RELATED 15 236 IPR006214 -
Trre13g03859 238 Pfam Inhibitor of apoptosis-promoting Bax1 27 234 IPR006214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03859 Trre-Chr13 46782716 46784385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g03859 4 238 Miscellaneous Gene Families AT1G03070 66.109 4.34e-113 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03859 K24205 - pvy:116125955 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03859 13 46782716 46784385 Trre13g03859 13 46782716 46784385 ECH
Trre13g03859 13 46782716 46784385 Trre1g02983 1 25514808 25516479 PCT