Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02951 ATGCCTTTTATGATGAAAATTCAACCGATCGATTTTCAGTTAGGTGAGGAGATTACTCGAGTTGAACCGGTTAAGCCGGTGGTCAAGTCACGGCTGAAGCGGCTCATCGAGCGTCAATTCTCCGGCGTTCTGAGAATTTCTGCTTCCGAGAAGATCACCGGTGGTGGTAGTGGTGGTTTAGGACCGCATTTGTGCAAGGAAGGATTTAATATTGTCGATGATTTCGAACCGAGCTCGGTTTGTTTGGCGAAAATGGTGACGAATTACATTGAGGAGAATCACGAGAAACAATCGGCTTCAAACTGCTGTAACTGCTTCAATATAAACTGTGAAGATAGCTCCGACGAAGAATCAGAATCGTTTATCGGTTATTCTGCTTCTGAAGCATGTGAAATCCTCAAGGGTTTGGTAGCTTGTAGAAGTACCGCTGAGAGAAATCTTCTCGCAGACACTGCAAAGATCGTTGATAAGAATAAGTTATGCAAACGCAAAGACAGTTTCTGCAGAAATATTGTTACAGAAGCTTTATCATCTCTCGGATACGATGCTTCCGTTTGTAAATCTCGCTGGGAAAAATCAAAATCTCCTTCATATCCTTCTGGGGAATATGAATATATTGATGTGATGTTAGGGAATGAACGGTTGATAATTGACATTGATTTTAAATCAGAATTTGAGATTGCTAGATCTACTAAATCGTACAAGATGATTCTCCAGAATCTTCCTTACATATTCGTTGGAAAAAGTGATCGTTTGCAGAGTATTGTGGCTGTTGTATCTGAGGCGGCGAAGCAGAGTTTGAAGAAGAAGGGAATGCATGTTCCACCGTGGAGGAGAGTTGAATATGTTAAATCAAAATGGCTCTCAACTTATACAAGAGTAACTGTGAATATGCAGAAACAGAAGCTTTTGATGGAAAATTGTGTTAGTGAGAGTTCTGTTGAAGACGAGGAGAAGACTGTGGTTGTTGAATGGAAGCCGCCGGAGTTGAAGCCGAAGGGTTCAATGGCTGGTGTTAAGGTTGTGACTGGTTTGGCAGTGGTGTTTGAGGAAGATAACCAGTTAAATTTTGACTGTTAA 1080 0.4139 MPFMMKIQPIDFQLGEEITRVEPVKPVVKSRLKRLIERQFSGVLRISASEKITGGGSGGLGPHLCKEGFNIVDDFEPSSVCLAKMVTNYIEENHEKQSASNCCNCFNINCEDSSDEESESFIGYSASEACEILKGLVACRSTAERNLLADTAKIVDKNKLCKRKDSFCRNIVTEALSSLGYDASVCKSRWEKSKSPSYPSGEYEYIDVMLGNERLIIDIDFKSEFEIARSTKSYKMILQNLPYIFVGKSDRLQSIVAVVSEAAKQSLKKKGMHVPPWRRVEYVKSKWLSTYTRVTVNMQKQKLLMENCVSESSVEDEEKTVVVEWKPPELKPKGSMAGVKVVTGLAVVFEEDNQLNFDC 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02951 359 PANTHER OS03G0796600 PROTEIN 27 300 IPR006502 -
Trre1g02951 359 NCBIfam uncharacterized plant-specific domain TIGR01615 170 294 IPR006502 -
Trre1g02951 359 Pfam PDDEXK-like family of unknown function 84 293 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02951 Trre-Chr1 25161577 25162820 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02951 - - gmx:100782749 456.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03903 13 47213623 47215056 Trre1g02951 1 25161577 25162820 PCT