Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03903 ATGAAGATTCAGCCGATTGATTCTCAGGCTCCGACAGAGAGAATTAAGCCTGTGGTCAAGTCGCGGCTTAAGCGTCTTTTCGAGCGACAATTCTCCGGTGTTCCGAAGAATTCACCGGTGGAGAAGATCGGCGGCGATGATGCACATCAACATAAGAGCAGCGGTTTCGTCGATTTCGAACCGAGCTCGGTGTGTTTGGCGAAAATGGTACGGAGTTTCATGGAAGAGAATCATGAGAAGCATTCAGTTTCATGTGCTCGTAATTGCTTCAACGGAAACTTCGATGATAGCTCTGATAGTGAACTTCACGCGCTTGGTGGTGGTGGTGGTGGTTCTTCCGGTGAAGCATACGAAATGCTCAAGGGTTTGGTAGCGTGTCCAAATGTTTATGAAAGAAATTTGTTAACTGACACAACTAAGATTATTGAGAAGAACAAAAATTTGTGCAAACGCAAAGACGATAATTGCAGAAAAATTGTTACTAATGAATTGTTAACTCTTGGATATGATGCTTCAATTTGCAAATCTCGTTGGGAAAAATCCACTTTCTGCATAGCTGGGGAATATGAATACATTGATGTGATGATGGGAAAAGAGAGGGTGATAATTGACATTGATTTCAGATCGGAATTTGAGGTTGCTCGATCTTCAAAGACTTACAAAGCGATTCTCCAAACACTTCCTTATGTATTTGTGGGGAAGAGTGATCGGTTACAGAGTATTGTAGCTATAGCTTCTGAAGCAGCAAAACAGAGTTTGAAGAAAAAGGGTTTGCATGTTCCACCTTGGAGAAAACTAGAATATGTTAGATCAAAATGGTTTTCTCCTTATACAAGAATTACACCACCTATGTTTTGTCCTTGGTCAAGGGAAATCAGTGAGGAAACTGATAGAAAACAGAGGGTTTTGATTGGTGGTGGTGGTGGTGGTGGTGAGTCTGAATTGAGTTGTGATGAGTCAGAGTCAAAAGTGGTGGTTGAATGGAAGCCACCAGAATTGAAACCCAAAAACTCTGTTCAGACTGGGGTTAAGGTTGTGACTGGTTTGGCAGCTGTGTTTCGTGAAAACCCATGA 1074 0.4209 MKIQPIDSQAPTERIKPVVKSRLKRLFERQFSGVPKNSPVEKIGGDDAHQHKSSGFVDFEPSSVCLAKMVRSFMEENHEKHSVSCARNCFNGNFDDSSDSELHALGGGGGGSSGEAYEMLKGLVACPNVYERNLLTDTTKIIEKNKNLCKRKDDNCRKIVTNELLTLGYDASICKSRWEKSTFCIAGEYEYIDVMMGKERVIIDIDFRSEFEVARSSKTYKAILQTLPYVFVGKSDRLQSIVAIASEAAKQSLKKKGLHVPPWRKLEYVRSKWFSPYTRITPPMFCPWSREISEETDRKQRVLIGGGGGGGESELSCDESESKVVVEWKPPELKPKNSVQTGVKVVTGLAAVFRENP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03903 357 NCBIfam uncharacterized plant-specific domain TIGR01615 157 280 IPR006502 -
Trre13g03903 357 PANTHER OS03G0796600 PROTEIN 18 289 IPR006502 -
Trre13g03903 357 Pfam PDDEXK-like family of unknown function 68 279 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03903 Trre-Chr13 47213623 47215056 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03903 - - gmx:100781835 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03903 13 47213623 47215056 Trre13g03903 13 47213623 47215056 ECH
Trre13g03903 13 47213623 47215056 Trre1g02951 1 25161577 25162820 PCT