Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02935 ATGAAGCTAATTCGTCAGAGGATCTTAATCATCTCTCTTCTCTTTCTCTCCCTTGTTGCTCCTCTCATTTTCTTCGGGAGAAGAGAGTTCCTTGAAGATTTGTATCGTGTTACATATAGTACGGATACTTTGAAGTCAAAAGAACAGATTCAAGAAGGTTCTGAAGAATTAGAAGAGCCAAATCAAGTTGTTTATAAGGAAAAAGATGTTGTTTCAACAATTAGTTACAGTTCAAAAAAGAATAATGATGCCGATGAACCTGGAATTCCAGTGTTTGAAAGAAATGGATTCAACCATGATGAAAGACAAGGCGAGGATGCTCAGAGAAAAGATTCATCCCCCACGGATGAAGATACAAATGTACATGCTGTTCCACATAGTATGTCGGAGGAGAATATTAGTGTGACAAATAAGCCATCAGATCGAATAGAAGACCGTCATCCTCTTTTAAACTCGCACTCTCATGAAGTGAAAAATCAGAAGGTTCGAGAGATTAAGGATCAAATTTTAATGGCTAAAGTATACTTAAAGTTTGCGCCACCAAGCAGCAACTCCCGCTTGAAGGAGCTGGAGCTACAAATGAAAGATATGGAACGAGCAGTAGAAGGAGCCACCCGGGATTTAGATTTACCTAGGAGTGTTTTGCAGGCAATGAGACACATGGAGGCCTCACTGTCTAGTGTCGGTCGTGCTTTCTCAGACTGTTCTTTGGTTTCTAAGCTTCAAGCAGTGAAGCGTAAAACTGAAGAGCAAGTTCGTTTTCAGAGAAGTCAAGCAACATATCTTGTTCATCTTGCTGTAAGGACTGCCCAAAAAAGCTTTCACTGTCTTTCTATGCGGCTGACTGCTGAATATTTTTCCCTGAGGCCTGAGGAGAGAAAGCTTCCAAATGAGAATAAGATTCATCATCCAGATCTTTATCACTATGCTGTCTTCTCTGACAATGTTCTGGCATGTGCAGTCGTTGTTAACTCTACTGTCTCTACTGCCAAGGAACCAGAGAAACTTGTTTTCCATATAGTGACTGATTCACTCAACTTGCCAGCGATCTCAATGTGGTTCTTGTTAAACTCTCCTGGCAATGCCACAGTCCATATACAGAGCATAGACAACTTTGAGTGGTTGTCGAAATACAATACCTTCTTTAGAAATGATCTCAGCGGACTATGGAATGCCAATTTGAAGGAAAATGTTATCGGAGCAGTTGGAACTTGTCAGGAAGGCAAAACCCCATTTCATAGGATTGATGCGTTCATAAACTTCTCAGATCCACTAATTCACCAGAGTTTTGATGTCAATTCTTGCACATGGGCGTTTGGGGTGAATTTGTTTGATTTGCAGCAATGGAGGACACATGATTTAACGGCTGTTTATCACAAATATTCGCAAATGGGTTCTAATAAGCCATTGTGGAATTGGAGTGTTGCACGTCTGCCTTTAGGTTGGCTCGCCTTCTATAACAAGACAGAGGTGTTGGACAGACGATGGCACATTCTTGGCCTCGGTCATAACTCGGGAGTCGATCGAAATGAGATTGATCAGGCTGCAGTTATACACTATGACGGGATTAGGAAGCCATGGTTGGATATTGCAATGGGCAGATATAGAAGTTACTGGACCAGATTTTTGGATTTTGACCACCCTTTTCTGCAACAGTGCAATCTCCAGCCATAG 1674 0.4152 MKLIRQRILIISLLFLSLVAPLIFFGRREFLEDLYRVTYSTDTLKSKEQIQEGSEELEEPNQVVYKEKDVVSTISYSSKKNNDADEPGIPVFERNGFNHDERQGEDAQRKDSSPTDEDTNVHAVPHSMSEENISVTNKPSDRIEDRHPLLNSHSHEVKNQKVREIKDQILMAKVYLKFAPPSSNSRLKELELQMKDMERAVEGATRDLDLPRSVLQAMRHMEASLSSVGRAFSDCSLVSKLQAVKRKTEEQVRFQRSQATYLVHLAVRTAQKSFHCLSMRLTAEYFSLRPEERKLPNENKIHHPDLYHYAVFSDNVLACAVVVNSTVSTAKEPEKLVFHIVTDSLNLPAISMWFLLNSPGNATVHIQSIDNFEWLSKYNTFFRNDLSGLWNANLKENVIGAVGTCQEGKTPFHRIDAFINFSDPLIHQSFDVNSCTWAFGVNLFDLQQWRTHDLTAVYHKYSQMGSNKPLWNWSVARLPLGWLAFYNKTEVLDRRWHILGLGHNSGVDRNEIDQAAVIHYDGIRKPWLDIAMGRYRSYWTRFLDFDHPFLQQCNLQP 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02935 557 MobiDBLite consensus disorder prediction 76 141 - -
Trre1g02935 557 SUPERFAMILY Nucleotide-diphospho-sugar transferases 307 555 IPR029044 -
Trre1g02935 557 Coils Coil 187 207 - -
Trre1g02935 557 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 130 378 IPR029993 GO:0047262
Trre1g02935 557 MobiDBLite consensus disorder prediction 118 136 - -
Trre1g02935 557 MobiDBLite consensus disorder prediction 95 117 - -
Trre1g02935 557 Pfam Glycosyl transferase family 8 381 531 IPR002495 GO:0016757
Trre1g02935 557 Pfam Glycosyl transferase family 8 276 377 IPR002495 GO:0016757
Trre1g02935 557 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 378 547 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02935 Trre-Chr1 24975758 24981402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g02935 1 556 Glycosyltransferase AT1G06780 40.000 4.11e-155 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02935 K13648 - gmx:100819255 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g02935 1 24975758 24981402 Trre1g02935 1 24975758 24981402 ECH
Trre13g03932 13 47433465 47439973 Trre1g02935 1 24975758 24981402 PCT