Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03932 ATGAAGCAATCTCATCATCGGTGGCAGAGGACTTTGATCCTCTGTCTCCTTTCTCTCTCCGTCGTCGCTCCCGTCGTTTTCGTTTCTCGCCGCCTTCAACTTCTCACTCGCGATGGTCGTCGCGAGTTTCTTGATGATTTATCTAGTATTAAATACAGAACAGATCCTTTAAATGCTATAGAACAGGAAGACTCGGAAGAATTAGAAGAGCCGAAGCAAGTTGTTTATAAAGAAAATGATGTTGATTCAAGACTTAGTGACGGTTCGGAAAACAATAATGATTCTGAAGAGTCTAGAATTGAGGGGTCTAGAAATAATTTTTTGGAAAAAAATGTTTCAGAACTCGACCATGATGAAACACAAGAACAGGAAGCTCAGCAGAAAGGATTGATCTCCACGGATGAAACAAAAGAACAGGAAGCTCAGCAGAAAGGATTGGTCTCCACGGATGAAACACAAGACCAGGATGCTCAGCAGAAAGGATTGTCCTCCACAGATGGAGATCAGAAGAAATTTAATATAACAGCTATGGATAATCAGAAGATACTAACTCACTCTCAAAGAAAGACAGATCAGAATATTAAAGTGAAAGCAAAGCAATCTGGTTTGACAGTAAACCAACATCGTCAGATTTCACGTCATCAGTCTCGCAGAGTGACAAATCAGACTGTTATGGAGATTAAGGATCAAATTATCAGAGCCAGAGCATATTTGGGCTTTGTTCCACCAAGCAGTACCTCACACTTGGCGAAGGAGTTGAGGTTGAGAATTAGAGAGATGGAACGTGCAGTTGGTGAAGCTACCAAGGATTCAGATCTTTCAAGGAGTGCTTTGCAGAAAATGAGACACATGGAGGCTTCACTGTCTAAAGCCAACCGTGCTTTTCCAGACTGTGCTGCTATGGCTTCTAAGCTCCGTGCAATGAATCATAATGCCGAAGAACAAGTTCGTTCTCAGCAACATGAAGTAACACATCTTGTTCATCTTGCTGCAAGGACAACCCCTAAAGGTGTTCATTGTCTTTCTATGCAACTAACTGCTGATTACTTTGCCCTGAGACCGGAGGAGAGAAAGCTGCCAAATGAAAATAAGATTAATGATCCGGAACTTTATCATTATGCCGTCTTCTCTGACAATGTTCTAGCATGTGGAGTGGTTGTTAACTCCACTGTGTCTAATTCCAAGGAACAGGAAAAAATTGTTTTCCATATAGTGACCAATTCACTCAACTTTCCCGCAATCTCAATGTGGTTCCTATTAAACCCTCCTGGGAAAGCTGCCATCCACATACAGAACATAGACAATTTTGAATGGTTGTCCAAGTACAATACATTCAAGAAACAAACTTCTAGTGACCCGAGATATACTTCTGAATTGAACCACCTCCGTTTCTACCTGCCAGACATCTTCCCCACTCTAAATAAGATTTTGCTCTTTGATCATGATGTGGTGGTGCAACAAGATCTCAGCACACTATGGAATATTAACATGGAAGGAAAAGTAATTGCAGGAGTTGGGACTTGTCAGGAAGGTGAAACTTCATTTCGCAGGATGGATATGTTCATAAACTTCTCAGATCCGTACATTGCAGAAAGGTTTGATGTCAATGCTTGCACATGGGCATTTGGGATGAACTTGTTTGATTTGCAGCAGTGGAGGAGACATAATTTAACCGGTGTCTATCACAAATATTTGCAAAGGGGTTCCAATATGCCATTGTTTAATACTGGAAGTCTGCCATTAGGCTGGCTCACTTTCTATAACAAGATTATGGTTTTGGACAGACGGTGGCACATTCTTGGCCTCGGTTATGACTCAGGCATTGACACAAAGAAGATTGAGCAGGCTGCTGTTATACACTACGATGGAATTAGGAAGCCATGGATGGATATTGGGATGGGAAGATATAAGAGTTATTGGTCCAATTTTATGAAGTTTGATCATCCTCTTTTGCGACGATGTAATATCCAGGCGTAG 1977 0.4143 MKQSHHRWQRTLILCLLSLSVVAPVVFVSRRLQLLTRDGRREFLDDLSSIKYRTDPLNAIEQEDSEELEEPKQVVYKENDVDSRLSDGSENNNDSEESRIEGSRNNFLEKNVSELDHDETQEQEAQQKGLISTDETKEQEAQQKGLVSTDETQDQDAQQKGLSSTDGDQKKFNITAMDNQKILTHSQRKTDQNIKVKAKQSGLTVNQHRQISRHQSRRVTNQTVMEIKDQIIRARAYLGFVPPSSTSHLAKELRLRIREMERAVGEATKDSDLSRSALQKMRHMEASLSKANRAFPDCAAMASKLRAMNHNAEEQVRSQQHEVTHLVHLAARTTPKGVHCLSMQLTADYFALRPEERKLPNENKINDPELYHYAVFSDNVLACGVVVNSTVSNSKEQEKIVFHIVTNSLNFPAISMWFLLNPPGKAAIHIQNIDNFEWLSKYNTFKKQTSSDPRYTSELNHLRFYLPDIFPTLNKILLFDHDVVVQQDLSTLWNINMEGKVIAGVGTCQEGETSFRRMDMFINFSDPYIAERFDVNACTWAFGMNLFDLQQWRRHNLTGVYHKYLQRGSNMPLFNTGSLPLGWLTFYNKIMVLDRRWHILGLGYDSGIDTKKIEQAAVIHYDGIRKPWMDIGMGRYKSYWSNFMKFDHPLLRRCNIQA 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03932 658 Coils Coil 250 270 - -
Trre13g03932 658 Coils Coil 302 322 - -
Trre13g03932 658 MobiDBLite consensus disorder prediction 142 183 - -
Trre13g03932 658 MobiDBLite consensus disorder prediction 76 193 - -
Trre13g03932 658 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 373 648 IPR029044 -
Trre13g03932 658 MobiDBLite consensus disorder prediction 76 124 - -
Trre13g03932 658 Pfam Glycosyl transferase family 8 340 631 IPR002495 GO:0016757
Trre13g03932 658 SUPERFAMILY Nucleotide-diphospho-sugar transferases 371 655 IPR029044 -
Trre13g03932 658 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 447 656 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03932 Trre-Chr13 47433465 47439973 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g03932 1 658 Glycosyltransferase AT1G06780 46.596 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03932 K13648 - gmx:100793193 952.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03932 13 47433465 47439973 Trre1g02935 1 24975758 24981402 PCT