Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02934 ATGTCTTCCATTAATCCCACTCCAACTTCCCCCCATTACAATTACAACTCCTTCCCTTCAACTTCCCCACGCGCCGCCACACTTCCCAACTACCCTACGCGCCGCCCATGGCAAAACTTCTTCGCTCTCCAATCCTTCAACCTCCCTTACTCCCTCCACGAATCCACCATCCGAATCAAACGGAACCTCAACCACTTCCGCTTCAACTACGCCACTACCATCCTCTCAATCCTCTTCCTCAGCCTTCTCTGGCACCCGTTCTCCCTCATCGTCTTCCTCGCCGTCTTCGCCGCCTGGTTCTTCCTCTTCTTCTTCCGTGACCGCCCCGTCGTCCTCCTCACTTACTCCATCGACGACCGCTTCATTCTCGCGATACTCTCCGCACTCACCGTCGTCGCTCTTGTCTTCACCGGCGTATGGCTCAATGTCTTGGTTGCGATTCTCGTTGGTGCTGCGGTGGTTGTTCTGCATGCGGCTTTTCGGAGTATTGATGATTTGTATTTAGATGAAGAAGAAATCTTTGATGGAGATTTGATTTCGGTTGTTGGTGGTAGCTTCAACACCAAGCGAACAGGGTAG 579 0.525 MSSINPTPTSPHYNYNSFPSTSPRAATLPNYPTRRPWQNFFALQSFNLPYSLHESTIRIKRNLNHFRFNYATTILSILFLSLLWHPFSLIVFLAVFAAWFFLFFFRDRPVVLLTYSIDDRFILAILSALTVVALVFTGVWLNVLVAILVGAAVVVLHAAFRSIDDLYLDEEEIFDGDLISVVGGSFNTKRTG 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02934 192 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 20 172 IPR004895 -
Trre1g02934 192 Pfam PRA1 family protein 32 171 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02934 Trre-Chr1 24970627 24971709 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02934 K20359 - gmx:100815700 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g02934 1 24970627 24971709 Trre1g02934 1 24970627 24971709 ECH
Trre13g03938 13 47490866 47491884 Trre1g02934 1 24970627 24971709 PCT