Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03938 ATGTCTTCTTCTTCTGCTTCATCATCTTCAGTACCTCATTACAGTTCTCTCCCTTCACATTCAAATTCCACAACACCAAACTTCATCTCACGCGCCACCACAACAACTAAATCAATATCCGTCACGCGCCGTCCATGGGAAGAAGTTTTCGCACTCTACTCATTCACGCGTCCTTATTCTCTCGGCGAAGCCAATTTACGCGTGAAACGGAACCTAAACCATTTCCGCGTAAACTACATCATGATCGTTCTCTTCATCTTGTTCCTTAGTCTCTTATGGCATCCTTTATCAATCATCGTTTTCTTGATCGCGTTGATAGCTTGGTTTTTCATCTACTTCTTCCGTGACGAACCGATTGTTCTGTTTGGTCGTGTTATTGATGATAGAGTTTCTGCGGCGGTGCTCGCGGTGGTGACTGTGGTGGCTTTAGGGTTTAGCGGTGTTTGGATGAACGCGTTGGTTTCTGTTATGATTGGTGTTGTGGTTGTTGTGTTGCACGGTGCGTTTAGGAGTACTGATGATTTGTATGTGGATGAACATGAAGGGTTGGTAGGTTTTGGTTGCAAAGAGGAGTATGATTGA 582 0.445 MSSSSASSSSVPHYSSLPSHSNSTTPNFISRATTTTKSISVTRRPWEEVFALYSFTRPYSLGEANLRVKRNLNHFRVNYIMIVLFILFLSLLWHPLSIIVFLIALIAWFFIYFFRDEPIVLFGRVIDDRVSAAVLAVVTVVALGFSGVWMNALVSVMIGVVVVVLHGAFRSTDDLYVDEHEGLVGFGCKEEYD 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03938 193 MobiDBLite consensus disorder prediction 1 29 - -
Trre13g03938 193 Pfam PRA1 family protein 42 179 IPR004895 -
Trre13g03938 193 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 24 181 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03938 Trre-Chr13 47490866 47491884 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03938 K20359 - gmx:100794255 251.906
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03938 13 47490866 47491884 Trre13g03938 13 47490866 47491884 ECH
Trre13g03938 13 47490866 47491884 Trre1g02934 1 24970627 24971709 PCT