Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02922 ATGCAGAGAGAGTATAATGGCAATGGCAAGCCCAGTGTTACACAGATCGTGGTGGCTTCTTCCATTGGGTTGATAATTGCTGCAGCAATGCATTATCGCCTAAAAAATTTGAGAGATGGAAAGATCATCCCACGTTTGAGATTATCAAAAGCTGGCCAAACTCCAAAGCTTGAGAGATTCTCTCATTACGTAGGCACGCAAATGGGGTTCAAAGATAGGAGGCACTGTCCTAATTTATGTAAATTGGCTTCTGAATACATAAGAAAATCTGAGGGATGTGAAGATGATCTCTATGCTTTCTTTGAACATGAACAAAATGCAGATTCACTTTTTGTCAAGCTTGTGGAAGAGTTTGAGAGATGCATTCTTAGTTACTTTGCTTTCCATTGGAGTCTTGGCGATTTATTGATAAGTCAGGTCTTGAGCTCTGACACTGAGCCAAAAAAGAAGTTCAAGCACATAGTTATGGCAGCAACTAGGGATCAAAGGGTTGAAAGGGTAACAAAGAATTTGAAGGTGGCTAGAGTATTCAATACATTAGTAGAAGAGATGAAAGCAATGGGACTTGTATCAAATGATGACAATCGATGCACGGAGGTTATGGCACCGGTGGCTCACAGTGATAGGAGTCCTGTGCTCCTTTTCATGGGTGGTGGTATGGGAGCTGGCAAGAGCACTGTGCTTAAAGACATTCTCAAAGAGCCTTTTTGGGTAGGAGCAGCTAGCAATGCTGTTGTCATTGAGGCAGATGCATTCAAAGAATCAGATGTTATCTATAGGGCCCTTAGCTCAAGAGGCCAACATCATGACATGATTAAGATGGCTGAATTGGTACACCAATCGTCAACAGATGCGGCCTCATCACTCCTAGTAACAGCACTAAATGAAGGACGAGACGTGATTATGGATGGAACATTCTCTTGGGTACCATTTGTTGTGCAAACAATAACAATGGCTAGGAATGTCCACCGCCGCCGTTACCGAATGGGAGCTGGCTACAAGGTGAATGATGATGGAACTGTAACAGACAATTACTGGGAACGAATTGAAAATGAAGAACCTGAACAAGTTGGAGGAAAAAAGAGGAAACCATATCGGTTAGAGCTTGTCGGAGTAGTATGTGATGCTTACCTTGCAGTCATTCGAGGCATAAGGAGAGCTATCATGTGTAGAAGAGCAGTAAGAGTGAAATCACAATTGAAATCACACAGAAGATTTGCAGATGCATTTATGACTTATTGTCAGCTAGTAGATACTGCAAGGCTATACAGCACAAATGCTTTAGAAGGCCCACCCAAATTGATAGGATGGAAAGAAAGAGACAAGACATTGCTAGTTGATCCAGATGAAATTGATTGTTTGAAGAGAGTTGCTAGGTTGAATGAAGATGCTGATTCTATATATGAACTTTACAAGCACCCTAACCCAACTTGTGAAGCAGGATCTATATGGAAAGATATTGTATTATCTCCTTCAAGGTTGAACATTCAACAAGAGCTCAAGTATTCAATTCAAAAGGTTGAGAGATTTGCAATGCAAAATGCTAACTTGTTGATTGAGAAGTAA 1566 0.4106 MQREYNGNGKPSVTQIVVASSIGLIIAAAMHYRLKNLRDGKIIPRLRLSKAGQTPKLERFSHYVGTQMGFKDRRHCPNLCKLASEYIRKSEGCEDDLYAFFEHEQNADSLFVKLVEEFERCILSYFAFHWSLGDLLISQVLSSDTEPKKKFKHIVMAATRDQRVERVTKNLKVARVFNTLVEEMKAMGLVSNDDNRCTEVMAPVAHSDRSPVLLFMGGGMGAGKSTVLKDILKEPFWVGAASNAVVIEADAFKESDVIYRALSSRGQHHDMIKMAELVHQSSTDAASSLLVTALNEGRDVIMDGTFSWVPFVVQTITMARNVHRRRYRMGAGYKVNDDGTVTDNYWERIENEEPEQVGGKKRKPYRLELVGVVCDAYLAVIRGIRRAIMCRRAVRVKSQLKSHRRFADAFMTYCQLVDTARLYSTNALEGPPKLIGWKERDKTLLVDPDEIDCLKRVARLNEDADSIYELYKHPNPTCEAGSIWKDIVLSPSRLNIQQELKYSIQKVERFAMQNANLLIEK 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02922 521 Pfam Zeta toxin 205 317 IPR010488 GO:0005524|GO:0016301
Trre1g02922 521 Gene3D - 193 431 IPR027417 -
Trre1g02922 521 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 206 345 IPR027417 -
Trre1g02922 521 PANTHER UNCHARACTERIZED 5 515 IPR044802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02922 Trre-Chr1 24785738 24789942 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02922 - - aip:107634095 894.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g02922 1 24785738 24789942 Trre1g02922 1 24785738 24789942 ECH
Trre13g03948 13 47672661 47676255 Trre1g02922 1 24785738 24789942 PCT