Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03948 ATGGCAGCCTCATCTATTGGGTTGATATTTGTCATAGCATTGCATTATCGTCTCAAACAGATTAGAGATCAAAAGATCATCCCACGTTTAAGATTATCACGTGGAGGTCATCATACCCCAAAGCTTGAAAGGTTCTCTCATTACGTAGCTAGGCAAATGGGGTTCAAGGATAGGAGAATATGTCCTGATCTATGTAGATTGGCTTCTGAATATATAAGCAAATGTGATGGGTTTGAAGATGATATATATGCATACTTTGAGAATGAACCAGATGCTGATTCACTTTATGTGAAGCTGGTGGAGGAGTTTGAGAGATGTATTCTTAGTTACTTTGGATTTCATTGGAACCATTGTGATATATTGATAAGTCAGGTGTTGAGCTCAGAAACTTCAGAGCCTAAAAAGAAGTTAAAGCACATAGTTATGGCAGCTACTAGGGAACAGAGGTTCGAGAGAGTTGCGAAGAATCTGAAGGTGGCAAGTGTTTTTAATACATTAGTAGAAGAGATGAAAGCAATGGGAATTGCAGTAAATGATGACTCTCAATGTACAGAGGTAATGGCTCCTGTCGCTCACAGTGATAGGAGTCCAGTCCTCCTTCTAATGGGGGGTGGTATGGGAGCTGGCAAGAGCACTGTACTCAAAGATATTCTCAAAGAACCTTTCTGGGCAGGAGCATCAGCAAATGCTGTAGTCATTGAAGCAGATGCCTTCAAAGAATCAGATGTCATCTATAAAGCACTTTGCTCAAGAGGCCATCATGACATGATTAAGACAGCCGAATTGGTACACCAATCATCCACAGATGCAGCATCATCCCTCCTAGTAACAGCACTAAACGAAGGTCGTGATGTAATTATGGATGGCACACTTTCCTGGGTACCATTTGTTGTGCAGACAATAACAATGGCTAGAAATGTCCACCGCCGCCGTTACCGCATGGGAGTTGGCTACAAGGTGAATGACGATGGAACCGTAATAGAAAACTATTGGGAACGAATTAAAGACGAGGAACCTGAACAAGTAGAAGGAAAAAAGAGAAAACCATATAGGATCGAGCTAGTTGGAGTAGTCTGTGATGCTTACCTTGCTGTTGTTAGAGGCATAAGGAGAGCTATCATGTGTAGAAGAGCTGTGAGAGTAAGATCACAATTGAAATCCCACAAGAGATTTGCTGATGCATTTATGACATATTGTCAATTAGTAGACAATGCCCGTCTATACTGCACAAATGCATTGGAAGGCCCTGCCAAGTTGATAGGTTGGAAAGAAAGAGACAGGACCTTACTGGTTGATCCGGATGAAATCGATTGTTTGAAGAGGGTTGCAAAGTTAAATGAAAATGCTAACTCTATATATGAACTCTACAAACCCCCCAACCCAGCTTGTGAAGCTGGATCTGTATGGAAAGACATTGTATTATCTCCTTCAAGGTTGAACATCCAACAGGAGCTCAAATTTTCAATCCAAGAGATTGAACGCTTGAAATGA 1491 0.4131 MAASSIGLIFVIALHYRLKQIRDQKIIPRLRLSRGGHHTPKLERFSHYVARQMGFKDRRICPDLCRLASEYISKCDGFEDDIYAYFENEPDADSLYVKLVEEFERCILSYFGFHWNHCDILISQVLSSETSEPKKKLKHIVMAATREQRFERVAKNLKVASVFNTLVEEMKAMGIAVNDDSQCTEVMAPVAHSDRSPVLLLMGGGMGAGKSTVLKDILKEPFWAGASANAVVIEADAFKESDVIYKALCSRGHHDMIKTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITMARNVHRRRYRMGVGYKVNDDGTVIENYWERIKDEEPEQVEGKKRKPYRIELVGVVCDAYLAVVRGIRRAIMCRRAVRVRSQLKSHKRFADAFMTYCQLVDNARLYCTNALEGPAKLIGWKERDRTLLVDPDEIDCLKRVAKLNENANSIYELYKPPNPACEAGSVWKDIVLSPSRLNIQQELKFSIQEIERLK 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03948 496 PANTHER UNCHARACTERIZED 3 495 IPR044802 -
Trre13g03948 496 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 321 IPR027417 -
Trre13g03948 496 Pfam Zeta toxin 191 304 IPR010488 GO:0005524|GO:0016301
Trre13g03948 496 Gene3D - 180 428 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03948 Trre-Chr13 47672661 47676255 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03948 - - gmx:100794775 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03948 13 47672661 47676255 Trre13g03948 13 47672661 47676255 ECH
Trre13g03948 13 47672661 47676255 Trre1g02922 1 24785738 24789942 PCT