Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02781 ATGAGACGCCGCCCTGTGGCGGGGGTTCTCCCTGACCAAATGGAAAAGGGGGGAGCTAAGAATCAAAATTCACGCCTTTGCTGTTTAGCATTCTTATCTGCATTCCTTTGGTTGTTTCTATTGTACTTTCATTTTGTATTCCTTAGAGGAGATAATAGTAATGCTATTGCTACTGTTAGTGATCAATTTGTTGATGATCACACAACCGAATCAAAATCGGTTTCTGTTGATCATGAATCTACCGAAATCCGTGTAACCGATGTCCCTCAAGTGAAACCCCTTCCTAGAAAGATTGGGTTACCGAATCCGGTGGAGATAAAGAGTTACACCCCTCCCCCTGAGAAGAAAAGTTACCCTTTTATTAAAGCGTTGAAAACGGCTGAAAATAAGAGTGATCCTTGTGGGGGAAGGTATATTTATGTGCATGATCTTCCCTCGAGGTTTAATGAGGATATGCTGAAGGAATGTAAGAGTTTGAGTCTTTGGACTAATATGTGTAAGTTTACTACCAATGCTGGTCTTGGACCGCCGCTTGAGAATGTTGAAGGGGTTTTCTCTGATACTGGTTGGTATGCGACGAATCAGTTTGCTGTTGATGTGATATTTAGCAATCGGATGAAACAGTATGAATGCTTGACTAATGATTCTTCCATTGCTGCTGCAATTTTTGTTCCATTTTATGCTGGGTTTGACATTGCGCGTTATCTTTGGGGTTATAATATCTCGAGGAGGGATGCGGCTTCGCTTGATCTTGTTGACTGGCTTATGAAGAGGCCGGAGTGGAATATAATGAATGGGAAGGATCATTTTCTTGTTGCAGGGAGGATAACATGGGATTTTCGGAGATTGTCCGAGGAAGAATCAGACTGGGGCAATAAGCTTCTGTTTTTACCGGCAGCGAAGAATATGTCCATGCTTGTGGTAGAGTCCAGCCCATGGAATGCAAATGATTTTGGGATTCCGTATCCTACATATTTCCACCCTGCAAAAGATGCTGATGTGTTCAATTGGCAGGACAGAATGAGAGGATTAGAGAGGAAGTGGCTTTTCTCCTTTGCTGGAGCTCCACGTCCTGGTAACGCCAAATCGATCAGGGGTCAATTGATCGAACAATGCAGAAGCTCACCGGTCGGTAAGCTATTGGAATGTGACTTTGGTGAAAGCAAATGTCATTCTCCTAGCAGCATAATGCAGATGTTTCAAAGCTCGCAGTTCTGCTTGCAACCTCAGGGTGATTCATATACACGAAGATCTGCCTTTGATTCAATGTTGGCTGGCTGTATACCTGTCTTCTTCCATCCAGGTTCGGCATACACACAATATACTTGGCATCTTCCTAAGAATTATACCAAGTATTCGGTCTTCATTCCAGAGGATGACATTCGTAAGAGGAATATGAGTATAGAGGAAATACTTGGTCAGATACCTCCTGAGCAAGTAAAAATCATGAGAGAAGAGGTCATTAGTCTCATTCCAGGACTAGTATATGCTGACCCCCGCTCCAAGTTAGAAACTCTTAAAGACGCATTTGATGTTGCTGTACAAGCCGTGATTAACAAAGTTACACATTTGAGGAAGGATATTATTGAAGATCGTATTGATAAATACTTCATTGAGGAGAATAGTTGGAAATATGCTTTATTGGATGAGGGAAAGCATGAGGTCGGAGCTCATGAATGGGATCCTTTCTTCTCAAAACCAAAAAAGGATGGTAGTGGAGAGTCCACTGATTCATCTGCTGAAGCTGCAAAAAATTCTTGGAAGAATGAGCAAAGAGGCAAATGA 1785 0.423 MRRRPVAGVLPDQMEKGGAKNQNSRLCCLAFLSAFLWLFLLYFHFVFLRGDNSNAIATVSDQFVDDHTTESKSVSVDHESTEIRVTDVPQVKPLPRKIGLPNPVEIKSYTPPPEKKSYPFIKALKTAENKSDPCGGRYIYVHDLPSRFNEDMLKECKSLSLWTNMCKFTTNAGLGPPLENVEGVFSDTGWYATNQFAVDVIFSNRMKQYECLTNDSSIAAAIFVPFYAGFDIARYLWGYNISRRDAASLDLVDWLMKRPEWNIMNGKDHFLVAGRITWDFRRLSEEESDWGNKLLFLPAAKNMSMLVVESSPWNANDFGIPYPTYFHPAKDADVFNWQDRMRGLERKWLFSFAGAPRPGNAKSIRGQLIEQCRSSPVGKLLECDFGESKCHSPSSIMQMFQSSQFCLQPQGDSYTRRSAFDSMLAGCIPVFFHPGSAYTQYTWHLPKNYTKYSVFIPEDDIRKRNMSIEEILGQIPPEQVKIMREEVISLIPGLVYADPRSKLETLKDAFDVAVQAVINKVTHLRKDIIEDRIDKYFIEENSWKYALLDEGKHEVGAHEWDPFFSKPKKDGSGESTDSSAEAAKNSWKNEQRGK 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02781 594 MobiDBLite consensus disorder prediction 559 594 - -
Trre1g02781 594 MobiDBLite consensus disorder prediction 559 575 - -
Trre1g02781 594 Pfam Exostosin family 134 470 IPR040911 -
Trre1g02781 594 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 36 515 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02781 Trre-Chr1 22999742 23001526 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02781 K20888 - gmx:100780467 965.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g02781 1 22999742 23001526 Trre1g02781 1 22999742 23001526 ECH
Trre13g04058 13 48486241 48487902 Trre1g02781 1 22999742 23001526 PCT