Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04058 ATGAGACGTCGCCCTTTACCGGGCATTCTCTCCAATCAAATGGAGAAATCAACAATCAAAACCCCCAATTCACGTATCTTCTTCCTCGCTTCTCTCTCCGCTTTTTTCTGGATTTTACTCCTCTACTTCCATTTCATAATCCTCCCCCAATCCTCAACCACCACCACCACCGCACCACCCAGAAAGAATTTCGGTTTCCCTGATATCAAAACCATAAACCCAATTCAAATCCATCAAAAAAATTTAACCTTTATCACATCCCATGAAACTGATCCATGTCAAGGTAGATACATTTATGTTCATGACCTTCCTTCAAGGTTCAACCAAGATATGTTAAGGGACTGTAAAAGTTTAAGTCTTTGGACCAACATGTGTAAGTTTACAACCAATGCAGGTCTCGGTCCGCCGCTTGAGAATGTCGATGGAGTTTTCTCTGATACTGGTTGGTATGCTACTAATCAGTTTGCTGTTGATGTTATTTTTGCTAATAGAATGAAACAGTATGAATGTTTGACAAATGATTCTTCAATTGCTGCTGCTGTTTTTGTACCTTTTTATGCTGGTTTTGATATTGCTAGATATCTTTGGGGTTATAATATTTCAATGAGAGATTCTGCTTCTATTGATCTTGTTGATTGGCTTGTGAAAAGACCTGAATGGAGTGTTATGAATGGGAGAGATCATTTTCTTGTTGCTGGTAGGATAACTTGGGATTTTAGGAGATTGTCCGAGGAGGAAACGGATTGGGGGAACAAGCTTTTGTTTTTACCTGCTGCTAAGAATATGTCTATGCTTGTTGTTGAATCTAGTCCTTGGAATGCTAATGATTTTGGGATTCCTTATCCTACTTATTTCCATCCTGCAAAAGATGAAGATGTGTTTGTTTGGCAGGAGAGGATGAGAAGGTTGGAGAGGAAATGGCTTTTCTCTTTTGCAGGTGCGCCGCGTCCTGATAATCCGAAATCTATTAGGGGTCAGATAATTGAGCAATGTAGGAGTTCTAACGTTGGGAAGCTTTTGGAGTGTGATTTTGGGGAGAGTAAATGTCATTCTCCTAGTTCTATAATGCAGATGTTTCAGGGGTCACTTTTTTGTCTTCAACCTCAGGGTGATTCTTATACAAGAAGATCTGCTTTTGATTCAATGCTAGCAGGTTGTATACCTGTGTTTTTCCATCCTGGTTCGGCGTATACACAATATACTTGGCATCTTCCTAAGGATTATACTAAGTATTCTGTGTTCATTCCTGAGGATGATATTCGAAAGAGGAATGTTAGTATAGAGGAGAGGCTTAGTCAGATACCTGAGGAGCAAGTGAGGATTATGAGAGAGGAGGTGATTAGTCTCATTCCTAGATTAGTGTACGCTGATCCTCGCTCTAAGTTAGAGACTTTGAAAGATGCTTTTGATGTTTCTGTACAAGCAGTGATTGATAAGGTTACCAATTTGAGGAAGGATATTATTGAAGGTCACACCGACGAAAACTTCATTGAGGAGAATAGTTGGAAATATGCATTGTTGGATGAGGGACAGCGTGAGGTAGGACCTCATGAATGGGATCCTTTCTTTTCTAAACCCAAGGATGGAAATGGGGAATCCAGTGACTCCTCTGCTGAAGTTGCGAAAAATTCTTGGAAAAATGAGCAAAGAACTCAATCATGA 1662 0.4001 MRRRPLPGILSNQMEKSTIKTPNSRIFFLASLSAFFWILLLYFHFIILPQSSTTTTTAPPRKNFGFPDIKTINPIQIHQKNLTFITSHETDPCQGRYIYVHDLPSRFNQDMLRDCKSLSLWTNMCKFTTNAGLGPPLENVDGVFSDTGWYATNQFAVDVIFANRMKQYECLTNDSSIAAAVFVPFYAGFDIARYLWGYNISMRDSASIDLVDWLVKRPEWSVMNGRDHFLVAGRITWDFRRLSEEETDWGNKLLFLPAAKNMSMLVVESSPWNANDFGIPYPTYFHPAKDEDVFVWQERMRRLERKWLFSFAGAPRPDNPKSIRGQIIEQCRSSNVGKLLECDFGESKCHSPSSIMQMFQGSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHPGSAYTQYTWHLPKDYTKYSVFIPEDDIRKRNVSIEERLSQIPEEQVRIMREEVISLIPRLVYADPRSKLETLKDAFDVSVQAVIDKVTNLRKDIIEGHTDENFIEENSWKYALLDEGQREVGPHEWDPFFSKPKDGNGESSDSSAEVAKNSWKNEQRTQS 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04058 553 MobiDBLite consensus disorder prediction 515 553 - -
Trre13g04058 553 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 81 473 IPR004263 GO:0006486|GO:0016757
Trre13g04058 553 MobiDBLite consensus disorder prediction 529 553 - -
Trre13g04058 553 Pfam Exostosin family 93 430 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04058 Trre-Chr13 48486241 48487902 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04058 K20888 - gmx:100790024 967.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04058 13 48486241 48487902 Trre1g02781 1 22999742 23001526 PCT