Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02771 ATGGCTTCAGATTCCAATTCAAACCTTAGAATCAACATAGAAAGCAATCCTTCCGAATCGCGCCTAGCCGAATTGAACATCAAGTGCTGGCCCAAATGGGGGTGTTCACCAGGTAAATACCAATTAAAATTTGATGCAGAGGAGACATGCTATTTGTTAAAAGGAAAGGTGAAAGTATACACAAAAAAGTCATCAGAATTTGTAGAGTTTGGTGCTGGAGATCTTGTGACAATTCCAAAAGGACTAAGTTGTACTTGGGATGTTTCTATTGCTGTTGATAAGTACTACAAATTTGAGGCTTCATCATCTTCTTAA 315 0.381 MASDSNSNLRINIESNPSESRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKVYTKKSSEFVEFGAGDLVTIPKGLSCTWDVSIAVDKYYKFEASSSS 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02771 104 PANTHER OS04G0445200 PROTEIN 5 99 - -
Trre1g02771 104 SUPERFAMILY RmlC-like cupins 28 88 IPR011051 -
Trre1g02771 104 CDD cupin_TM1112-like 30 98 - -
Trre1g02771 104 Gene3D Jelly Rolls 2 98 IPR014710 -
Trre1g02771 104 Pfam EutQ-like cupin domain 23 96 IPR008579 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02771 Trre-Chr1 22925054 22925487 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02771 - - gmx:100793722 200.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g02771 1 22925054 22925487 Trre1g02771 1 22925054 22925487 ECH
Trre13g04082 13 48700639 48701080 Trre1g02771 1 22925054 22925487 PCT