Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04082 ATGGCTTCAGATTCCAATTCAAATCTTAGAATCACCATTGAAAGAAATCCTTCTCAGTCACGTTTAGCTGAATTAAACATCAAATGCTGGCCCAAATGGGGTTGTTCACCAGGAAAGTACCAATTGAAATTTGATGCTGAAGAAACATGCTATTTATTGAAAGGGAAAGTGAAAGCATACACAAAAGGTTCATCAGATTTTGTTGAGTTTGGTGCTGGAGACCTTGTCACCATTCCAAAAGGACTCAGTTGTACTTGGGATGTTTCTGTTGCTGTTGACAAGTACTACAAATTTGAATCTTCTTCTTCTTCATCATCTTCACAATCTTGTTAA 333 0.3694 MASDSNSNLRITIERNPSQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSDFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESSSSSSSSQSC 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04082 110 PANTHER OS04G0445200 PROTEIN 5 99 - -
Trre13g04082 110 Gene3D Jelly Rolls 2 98 IPR014710 -
Trre13g04082 110 Pfam EutQ-like cupin domain 23 96 IPR008579 -
Trre13g04082 110 CDD cupin_TM1112-like 30 98 - -
Trre13g04082 110 SUPERFAMILY RmlC-like cupins 20 96 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04082 Trre-Chr13 48700639 48701080 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04082 - - gmx:100793722 204.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04082 13 48700639 48701080 Trre13g04082 13 48700639 48701080 ECH
Trre13g04082 13 48700639 48701080 Trre1g02771 1 22925054 22925487 PCT