Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02683 ATGAATTCTCTCCCGAAAACTCACCACTATCATCACATCTCTTTCACTCACCGCCATTATTCATTGCAAACATCCTTCTCTACATTCTCTTTCCCCTCTTTACCTTCTCACCAATTCTCTTCTTCACCCTCCATCAAAGCCTCTTCCTCATCCTCACCAAAAAATAACAACAACCCTTTTCAAAAACCCCAAAACGCTTTTTCCCAATTGCTCCGAACACTAAACCCCATTTACTCACCTCTCTTCGAACCAGCCTATGTCGCAGCAACAATTATATTTTTCTTCATGTTCCGCGTTCAGCACAATCCCACCACCGCCACATCACCACTCCTACCTCCTCCGCCGGCGGAGACTTCCACCATCACCACCACCGCAACCGAAAATCTATCTATTAAAGAAAACAACTCTTCAATTGAAGAGAAACTGATTGAAACTTCCAACGACGCGAATGCTCTTCGGTCTTTGGTTGAGGGATTTGTTAGAACGCGCAAACTCAGCGAAGCAATTCGTGCTGCGGACCGTTTAATCGAACTGGAACCGGATGATTTAGCTTTGATATTACTAAAATCGCATTTGCATAGTTACAATGGTGAACATAAATTGGCTAAGAAAGGTTTTGAACTTACTTTGCAGCAAGATCCGTTAAACTTCGAAGCTTATCGCGGTCTTTTGATGGCAATTTCAAACCTGGAAGAACCAAGGGAGGGTTTTTTGAAAAAGGTTGATGAAATGGTGAAGTTTTTTGAGGAGAAAAAGATGGAATCAGAAGCTAGGGAATTTAAGCTTTTGATTGCACAGGTGAAGGTTATGGAAGAAGATTTCACTGGTGCATTGAAGGTGTACGAGGAAATTGCGAAGCAAGAACCAAGTGATTTTAGACCTCATTTGTGTCAAGGTGTTGTGTATACTCTACTTAGAAAGAATGATGAAGCTGAGAAACAGTTTGAGGAGTATAGGAAACTTGTTCCAAAGAATCATCCTTATAAAAAGTATTTTGAGGATAATACTAAGATTTTGGCCAAGAAGATAGAGAATGGAGGAATAGAAGCAAATATTTGA 1059 0.407 MNSLPKTHHYHHISFTHRHYSLQTSFSTFSFPSLPSHQFSSSPSIKASSSSSPKNNNNPFQKPQNAFSQLLRTLNPIYSPLFEPAYVAATIIFFFMFRVQHNPTTATSPLLPPPPAETSTITTTATENLSIKENNSSIEEKLIETSNDANALRSLVEGFVRTRKLSEAIRAADRLIELEPDDLALILLKSHLHSYNGEHKLAKKGFELTLQQDPLNFEAYRGLLMAISNLEEPREGFLKKVDEMVKFFEEKKMESEAREFKLLIAQVKVMEEDFTGALKVYEEIAKQEPSDFRPHLCQGVVYTLLRKNDEAEKQFEEYRKLVPKNHPYKKYFEDNTKILAKKIENGGIEANI 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02683 352 MobiDBLite consensus disorder prediction 42 63 - -
Trre1g02683 352 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 43 330 - -
Trre1g02683 352 ProSiteProfiles TPR repeat profile. 149 182 IPR019734 GO:0005515
Trre1g02683 352 Gene3D Tetratricopeptide repeat domain 126 350 IPR011990 GO:0005515
Trre1g02683 352 SUPERFAMILY TPR-like 149 326 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02683 Trre-Chr1 22130609 22131667 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02683 - - cam:101497721 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g02683 1 22130609 22131667 Trre1g02683 1 22130609 22131667 ECH
Trre13g04154 13 49405025 49406116 Trre1g02683 1 22130609 22131667 PCT