Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02533 ATGGGAATACTATACGATGATGTAGTGATTATCAAACCACCAGAAAAAGAAGGTGACCCAACTGTTGTTACTGTCAATTGCCCTGACAAAACCGGTCTTGGTTGTGACCTATGTCGTATCATACTCTTCTTTGGTCTTAACATTGTTAGAGGAGACGTGTCAACTGATGGGAAATGGTGTTACATAGTTTTCTGGGTTGTTGGGAAACAGAAGACAAGATGGAGTTTGTTGAAGAAGAGGATGGTTGAAGCATGTCCGACTTGTTCTTCAGCTTCTGGAATCTCTTATTATCGCTCGGATTTGCAGCCTCCTAAGCCACCTGATGTTTTTCTTTTGAAATTTTGCTGTCATGATCGAAAAGGACTGTTACACGATGTTACGGCAGTTCTTTGTGAGCTAGAGCTTACTATTACCAAAGTTAAGGTTTCCACTACACCTGATGGCAAAGTCATGGATCTGTTTTTCATCATCGATAACAGAGAACTTCTACATACAAAAAGGAGAAAAGATGATACGATCGAACAGATTCAAGATGTTTTGGAGAATTCTATCCTTACTATTGACATTGAATTGGTTGGACCAGAAATCACTGCTTGTTCACAGGTATCTTCATTCCTTCCGGCTGCAATCACAGATGACGATTATAATTTGGAATTGCCTGATTCAGTTCGAAGTGGAACACTCCGGTCAGATTATGTTTCTATCACGATGGACAACTTGCTAAGTCCGGCTCATACCCTTGTTCAAATTATGTGCCAAGACCACAAAGGCCTTCTTTATGACATCATGAGAACTATTAAAGATTACAACATGAAGATTTCTTTCGGGCGTTTCACTACAAAACCTAGACGAAAATGTGAGATGGACTTGTTCATCATTCAAGCAGATGGCAAAAAGATAGTTGACCCAAACAAGCAGAATTCTTTGTCATCGCGTTTTAGAACAGAACTATTTCGTCCACTTCGAGTAGCTGTTGTGAGCAGAGGCCCTGATATTGAGCTTCTGGTTGCAAACCCTGTTGAGTTGTCTGGCAACGGACGGCCCCTAGTTTTTTATGATATTACTCTTGCTCTCAAAATGCTCGACATTTGCATCTTTACGGCTGAAATCGGGAGACATGTGATTGCAGACCGCGAGTGGGAAGTTTATAGAATCTTGCTCGATGAAGGCGAGGGGTTGTCTGTTCCAAGAAACAAAATTGAGGAGGGAGTTTGGAAGATGTTGATGGGTTGGGATTAA 1239 0.4124 MGILYDDVVIIKPPEKEGDPTVVTVNCPDKTGLGCDLCRIILFFGLNIVRGDVSTDGKWCYIVFWVVGKQKTRWSLLKKRMVEACPTCSSASGISYYRSDLQPPKPPDVFLLKFCCHDRKGLLHDVTAVLCELELTITKVKVSTTPDGKVMDLFFIIDNRELLHTKRRKDDTIEQIQDVLENSILTIDIELVGPEITACSQVSSFLPAAITDDDYNLELPDSVRSGTLRSDYVSITMDNLLSPAHTLVQIMCQDHKGLLYDIMRTIKDYNMKISFGRFTTKPRRKCEMDLFIIQADGKKIVDPNKQNSLSSRFRTELFRPLRVAVVSRGPDIELLVANPVELSGNGRPLVFYDITLALKMLDICIFTAEIGRHVIADREWEVYRILLDEGEGLSVPRNKIEEGVWKMLMGWD 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02533 412 ProSiteProfiles ACT domain profile. 111 194 IPR002912 -
Trre1g02533 412 SUPERFAMILY ACT-like 107 182 IPR045865 -
Trre1g02533 412 Gene3D - 109 191 - -
Trre1g02533 412 Pfam ACT domain 112 164 IPR002912 -
Trre1g02533 412 SUPERFAMILY ACT-like 18 79 IPR045865 -
Trre1g02533 412 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 9 400 IPR040217 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02533 Trre-Chr1 20580038 20583070 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02533 - - gmx:100816138 730.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g02533 1 20580038 20583070 Trre1g02533 1 20580038 20583070 ECH
Trre13g04322 13 50867030 50869823 Trre1g02533 1 20580038 20583070 PCT