Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02461 ATGAAGGGTGAAACAGTAAATGTGACATGGCTTGGTGGTTTTTGGCCAGTTTCACGCAAGATTGGTTCAGATGACAAAGATGGAATTGGAATTATGGCATTTGAAGTTGCAGGGTTGATGTCAAAGGTTGTTAATTTTTGGCATTCTTTGAGTGATAATGAAGTAATGAATCTAAGAGAATGGATAGTAAATTCAGTTGGTGTTAAAATGCTTGTTTCTGATGATGAATATTTCTTAATGGAACTTACATGGAATGAGATTCTTAATAATTTTCAATCTATATCACAATCTGTTGCAAGGTTAGGTTGGGAATATAGATTGAAAAAGATGGAGAAAAAGGTCAAGAAAATGGAAAGATTTGTTACTTCTATGTCAATTTTGTCTCAAGAGCTTGAGGTTTTAAAAGAGTGTGAACAAACTTTAAGGAGAATGAAGTTAAATCGCGACATGGTTGATAAAGCGAAATTGGTCGAGTTTCAGAAGAAGGTTATGTGGCAGAGACAACAAGTGCAAAATGTAAGAGATTTGTCGCCTTGGAGTAGAAGTTATGACTATATTGTTAGGTTGTTAGCAAGATCATTGTCCACAATTCTTGAGAGAATCATACTTGTGTTTGGAAATAGTCATTTACCAATTGAAACCCAACAAAATGATTCCTCAAGAACAATGAATTATACTAACAATCGTATCGCGCGCAACCATTCCTTCCCGGCTCTTAATGTCATGCAATCTTCGGTTCATCCTTCCGAGACAAAACTAAACGAATTTTGTTCGGGACCAATTGGAAGAAAGAACAAGTGCAAGAAAGAGAAGAAAGTGCAACAATTGCTTCACTCACAAGATTCATGTGAAAGGCTTCTCCCCTCAGAAGGAAAGCAATTGAAGTATATTGGATCGTTCAAAGGTTGCATATCTATTCAAAACGATTCCCACGAAGTACAGAGTTGTATTCCATCTAACGGTGGTTCTACGAGGAAAAACATCGATGTCAAAGCGAAACCGGTAGTTAATAAGTCGTCTTTCTTCCATAGAAGTAGAGTTTATTTTAAACTATCTCTCAAGGAAAAGTTAAAGCCAGTTCCATCAACCCTTGGTGATGCAGCTTTAGCACTACATTATGCAAATGTGATTGTACTGATAGAGAAGATAGTGTCATCACCTCGCATGAATATGATCGATGTTCGAACGAGAGACGATCTTTACAATAGGCTACCGACGACTATAAGAACAGCTCTAAGGAGTAAGCTTAAATGGTATGCCAAAGGTAAGCTTGAAACAGAATGGAATGTGGTACTCACACAGATATTGGAGTGGTTAGCTCCACTTGCACACAACATGGTAAAGTGGTATTGTGAGAGGAACTTTGAGAAGGAACATACTAGTTTGAAAGCAAATGTTTTACTTGTCCAAACTCTTTACTTTGCAAATCAAGCAAAAGCTGAAGCTGCAATTGTTGAACTCCTTGTTGGTCTTCATTATGTATGCAGGATTGATAAAAAGCAGGTTCTAGATCGTTTAAGAAGAAATTAG 1530 0.3699 MKGETVNVTWLGGFWPVSRKIGSDDKDGIGIMAFEVAGLMSKVVNFWHSLSDNEVMNLREWIVNSVGVKMLVSDDEYFLMELTWNEILNNFQSISQSVARLGWEYRLKKMEKKVKKMERFVTSMSILSQELEVLKECEQTLRRMKLNRDMVDKAKLVEFQKKVMWQRQQVQNVRDLSPWSRSYDYIVRLLARSLSTILERIILVFGNSHLPIETQQNDSSRTMNYTNNRIARNHSFPALNVMQSSVHPSETKLNEFCSGPIGRKNKCKKEKKVQQLLHSQDSCERLLPSEGKQLKYIGSFKGCISIQNDSHEVQSCIPSNGGSTRKNIDVKAKPVVNKSSFFHRSRVYFKLSLKEKLKPVPSTLGDAALALHYANVIVLIEKIVSSPRMNMIDVRTRDDLYNRLPTTIRTALRSKLKWYAKGKLETEWNVVLTQILEWLAPLAHNMVKWYCERNFEKEHTSLKANVLLVQTLYFANQAKAEAAIVELLVGLHYVCRIDKKQVLDRLRRN 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02461 509 Pfam Domain of unknown function (DUF3475) 31 87 IPR021864 GO:0045927
Trre1g02461 509 Coils Coil 127 147 - -
Trre1g02461 509 PANTHER BNAC09G50660D PROTEIN 26 102 - -
Trre1g02461 509 Pfam Protein of unknown function (DUF668) 363 448 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02461 Trre-Chr1 19940882 19942492 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02461 - - gmx:100804666 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g02461 1 19940882 19942492 Trre1g02461 1 19940882 19942492 ECH
Trre13g04404 13 51609700 51611388 Trre1g02461 1 19940882 19942492 PCT