Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04404 ATGAGAGGTGAATTGGTTAATGGGTCATGGCTTAATTCTTTGTGGCCGGTTTCGCGCAAGAATGTATTAGATAACAAGGCGGTTGTTGGAATTTTGGCGTTAGAAGTTTCAAGTTTGATGTCGAAGATAAGTAATTTGTGGCAGACTTTGAGTGATTGGGAGGTTTTGAATTTAAGGGAAGAGGTAGTGAACTCTGTTGGGATCAAAAGGTTGGTTTCTGAGGATGATGATTACTTGATGGAGCTTGTATTGAATGATATACTTGATAATTTTCAATCTCTAGCGCGGTCTGTTGTTAGGTTGGGTAAGAGATGCACGGATCCGGTTTATCACGGATTTGAACATTTTGTTCGCAGTCCGGTTCAAAATTATACTCAATGGTCGGGGTGGGAATACAAATGGAAGAAGATGGAGAGAAAAGTGAAGAAAATGGAAAAGTTTGTTGCCTTCACGACACAATTTTGTGAAGAGCTTGAGGTACTAGCAGAGGTTGAACAGACTTTCCGTAGAATGCAAGCAAATCCTGAACTGCATCAGGTAAAGTTGCTCGAGTTTAAGAAGAAGGTCACGTGTCAACGCCAGGAAGTGAAGAATCTAAGAGACATGTCTCCATGGAGTAGAAGTTGTGACTATGTTGTCCGGTTGCTGGTAAAATCACTATTTACCATACTCGAGAGGATCATATTTGTGTTTGGAAATAATCACTTACCATCTTTACAACAAGAAAATGACTCTCAGGATATGAATGCTAATAATCTTCTCCGTAGTCAATCTTTTTCTGTTTTTATGCATTCTTCCATTTATCCTTCAGAGAATGATCTCTACAGATTCAACTCAGGTCCTGTTGGGAGAAGGCCGTACTTCTTATTCGACAAGAACAAAAGAAACAAGGAACCTAAGAAGGCTCTTCATTCATCAGATAAACTCGGAAAGCACAAACGTTCGGAAAGCAAGCAGTTAGGAAATATCGGTCCATTCAAAAGTTGCATGTCTGTTACAAACAATTCTCCTGTCATACAGAGTTATGTGCAGACAAATGGTTATGGCGGTTCTATGAGATTGACCGATTCTTATATGAAATATGTTGATAAAATGAATACAGTTGAGAAACCATATATCTCCAACAGAATTAGAATATATTCTAAACTATGCATCAACAACAGGTTAAAGCCAACTTCATTTACCCTTGGTGATATGGCTTTAGCCATACATTATGCAAATACGATTGTATTGATCGAAAAGATGGCATCGTCGCCTCATTCAATTGACCTTAAAGCAAGAGATGATTTGTACAATATGCTTCCGACTAGTATAAAAAATGTTCTGAGGGATAAGCTCAAATGCCAAGCAAAAAGCAAATCTTCCTCAGTCCATGATGCAGACCTTGCAACAAAATGGAGACCAATACTCGAACAGATATTAGAATGGTTGGCTCCACTTGCACATAACACTATAAGTTTGCATTCTGAGAGAAATTTCGAGAAGGAGCATACAACTGTAAATGGAAATATTTTACCGGTACAAACTCTTTATTATGCAAATCAAGCAAAAACCGAAGCTGCAATGGTTGATCTTCTTGTAGGTCTTAACTATGTATGTAGGATTGAAACAAAAGTAGGTATGAAAGATAGAATGGAGTTTGCTAGCAGATCAGTTAATGGTCCTTGTATGAGAAATATGAGAATGTAA 1689 0.3801 MRGELVNGSWLNSLWPVSRKNVLDNKAVVGILALEVSSLMSKISNLWQTLSDWEVLNLREEVVNSVGIKRLVSEDDDYLMELVLNDILDNFQSLARSVVRLGKRCTDPVYHGFEHFVRSPVQNYTQWSGWEYKWKKMERKVKKMEKFVAFTTQFCEELEVLAEVEQTFRRMQANPELHQVKLLEFKKKVTCQRQEVKNLRDMSPWSRSCDYVVRLLVKSLFTILERIIFVFGNNHLPSLQQENDSQDMNANNLLRSQSFSVFMHSSIYPSENDLYRFNSGPVGRRPYFLFDKNKRNKEPKKALHSSDKLGKHKRSESKQLGNIGPFKSCMSVTNNSPVIQSYVQTNGYGGSMRLTDSYMKYVDKMNTVEKPYISNRIRIYSKLCINNRLKPTSFTLGDMALAIHYANTIVLIEKMASSPHSIDLKARDDLYNMLPTSIKNVLRDKLKCQAKSKSSSVHDADLATKWRPILEQILEWLAPLAHNTISLHSERNFEKEHTTVNGNILPVQTLYYANQAKTEAAMVDLLVGLNYVCRIETKVGMKDRMEFASRSVNGPCMRNMRM 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04404 562 Pfam Protein of unknown function (DUF668) 395 485 IPR007700 GO:0045927
Trre13g04404 562 PANTHER BNAC09G50660D PROTEIN 23 546 - -
Trre13g04404 562 MobiDBLite consensus disorder prediction 297 317 - -
Trre13g04404 562 Pfam Domain of unknown function (DUF3475) 31 87 IPR021864 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04404 Trre-Chr13 51609700 51611388 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04404 - - gmx:100809482 772.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04404 13 51609700 51611388 Trre13g04404 13 51609700 51611388 ECH
Trre13g04404 13 51609700 51611388 Trre1g02461 1 19940882 19942492 PCT