Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02399 ATGACTGTGACTTACAACAACAAAGAAATCTTTAATGGATATGAAGTACCCTTTCCTTCTACGGTTAGCAACAGGCCAAGGATTCAGATTGGAGGAGGGGACATGAGGCCCCTCTTTACACTGATCATGATAGATCCGGATGTTCCTGGCCCAAGTGATCCTTATATGAAAGAACACTTGCACTGGATGGTGACCGACATTCCAGGGACAACAGATACCACATTTGGGAAAGAGGTGATGAGTTATGAAAAACCAAACCCTAATATAGGAATCCACAGGTATGTGTTTGTTCTTTTCAAGCAAGAAAAGGGGAAGAAGCACTCAATTACTCCTCCTTTTTCAAGGGATCACTTCAACACACGCACTTTCTCTGCTCAAAATTACTACCTTGGTGTCCCTGTTGCTGCTGCTTTTTTCAATGCTAGAAGGGCAACTGCTCAAAGGAGACGTTAG 453 0.4327 MTVTYNNKEIFNGYEVPFPSTVSNRPRIQIGGGDMRPLFTLIMIDPDVPGPSDPYMKEHLHWMVTDIPGTTDTTFGKEVMSYEKPNPNIGIHRYVFVLFKQEKGKKHSITPPFSRDHFNTRTFSAQNYYLGVPVAAAFFNARRATAQRRR 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02399 150 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 2 144 IPR035810 -
Trre1g02399 150 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 39 61 IPR001858 -
Trre1g02399 150 Pfam Phosphatidylethanolamine-binding protein 23 126 IPR008914 -
Trre1g02399 150 CDD PEBP_euk 1 134 IPR035810 -
Trre1g02399 150 Gene3D - 1 150 IPR036610 -
Trre1g02399 150 SUPERFAMILY PEBP-like 1 142 IPR036610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02399 Trre-Chr1 19290201 19293205 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02399 K06910 - qsu:112017308 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04461 13 52218090 52219344 Trre1g02399 1 19290201 19293205 PCT