Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02385 ATGGCCTTGAAGATTTATTTCTTCATTCTTTCCTTAGCAGCTTTAGCTCTATGCACTTCAGCATATTACAGCAATTCGATTAATTTTAGTTATATTGGTCCAAACGGTCCTGATAAGTGGGGAAGCTTGAGTCCGAACTACGCAACATGCTCAAATGGGAAAATTCAAAGTCCTGTGAATATTGCATACACAGATATTGTCCTCAACAATGAATTGAAATCTTTAGACAGAAACTATGTTCCAACAAATGCAACACTAGTTAACAACCAATTCAACATTGGGGTGCATTTTGAAGGAAAAGTGGGAGATATTAATATAAATGGAAAGAATTACTCATTGAGACAACTTCATTGGCATGTTCCTGCAGAGCACTGGGCTCATGGTCGTAGACATGAGGCAGAGCTCCACCTAGTTCACCTCACAGAAGATTTGAGTAACATAGCAGTTATAGCCGCCCTCTACAATTTGGGTGATCCTGATCCTATAATCTCCAAGATTGAAGACAAGTTGAATGGTCTATACTTTAAGAACCGTGAAGGCATTAAAGATGCTAAAATTGCTCTTGGAACTTTTGATGTAGAGGAATTAAATAAAAAAATTCATAGGTATTATAGATATGTTGGCTCTCTCACTACTCCTCCATGTACAGAAGGTGTCATTTGGAACATCATTGGAAAGGTGAGGACACTCTCGAAAGAACAACTTAAACTTCTTAAGGCACCTTTGGATGTAGAGTTCCAGCGCAACGCAAGGCCACTTCAACAATTGAATGGTCGCAAAATTGAGATGTACTACTCCCACCCCAACTAG 810 0.3901 MALKIYFFILSLAALALCTSAYYSNSINFSYIGPNGPDKWGSLSPNYATCSNGKIQSPVNIAYTDIVLNNELKSLDRNYVPTNATLVNNQFNIGVHFEGKVGDININGKNYSLRQLHWHVPAEHWAHGRRHEAELHLVHLTEDLSNIAVIAALYNLGDPDPIISKIEDKLNGLYFKNREGIKDAKIALGTFDVEELNKKIHRYYRYVGSLTTPPCTEGVIWNIIGKVRTLSKEQLKLLKAPLDVEFQRNARPLQQLNGRKIEMYYSHPN 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02385 269 CDD alpha_CA_prokaryotic_like 36 263 IPR041891 -
Trre1g02385 269 Pfam Eukaryotic-type carbonic anhydrase 35 263 IPR001148 -
Trre1g02385 269 SUPERFAMILY Carbonic anhydrase 28 261 IPR036398 -
Trre1g02385 269 Gene3D Alpha carbonic anhydrase 25 267 IPR036398 -
Trre1g02385 269 SMART Carb_anhydrase_2a 29 265 IPR001148 -
Trre1g02385 269 PANTHER CARBONIC ANHYDRASE 29 260 IPR023561 GO:0004089|GO:0008270
Trre1g02385 269 ProSiteProfiles Alpha-carbonic anhydrases profile. 27 265 IPR001148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02385 Trre-Chr1 19217986 19220687 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02385 K01674 - gmx:100797401 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g02385 1 19217986 19220687 Trre1g02385 1 19217986 19220687 ECH
Trre1g02385 1 19217986 19220687 Trre13g04338 13 50966043 50968362 PCT