Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04338 ATGAAGCACCAAAACCAATTTTCGATTGCAATTTTGCTAATATCAATAACCATCCTATTTTATTCAACATTAACAACTTCTCTTGAAGAACCTGAGTATGGATACAATGAAAAAAGTGAAAATGGGCCTAAACATTGGGGTGATCTAAAAAATGAATGGGCAGCATGTAAAGGGGACATGCAATCTCCAATTGATTTGTCAAGTCATAGAGTAACTTTGATTCCAAATACATGGAAGCTAAAGAGTAGCTACAAGCCTCAACATGCTACTGTATCCAATAGGGGTCATGATGTTGCAGTGACTTGGGAAGGTGATGCTGGCTCTATTGACATAAATGGATCAGAGTATTTCCTCCAACAAAGCCATTGGCACTGGCCATCTGAACATACCATCAATGGAAGAAGGTATGACTTAGAGTTGCACATGGTTCATGTTAGTCCTCAGCCAGATGGAACAAACAAGACTGCTGTTGTTGCTATTTTGTACAAGTATGGTTCACCTGATCCATTTCTCTCCGAGTTGGTAAAATACATAGTAGAAGTTCCTGATGAAGAAGAAGAGACAAGCATAGGTGTTATTGATCCCTCAAAAATATTCAAGAGTTCAAAGTTGTATTACAGATACATGGGATCACTAACTGCACCTCCTTGTACTGAAGGGATCATTTGGACCATTAATAAGAAGATAAGAACAGTATCAAGAGGACAAGTGAAGCTACTCAAGAATTCTGTGCTTAAATATTATGCAAAAAGGAATGCAAGGCCAGTGCAGATCCTGAATCAGAGAGAGATTGAACTGTATGAACCAAAGGCAGAGAGCAAACCTCACTATTGA 834 0.3861 MKHQNQFSIAILLISITILFYSTLTTSLEEPEYGYNEKSENGPKHWGDLKNEWAACKGDMQSPIDLSSHRVTLIPNTWKLKSSYKPQHATVSNRGHDVAVTWEGDAGSIDINGSEYFLQQSHWHWPSEHTINGRRYDLELHMVHVSPQPDGTNKTAVVAILYKYGSPDPFLSELVKYIVEVPDEEEETSIGVIDPSKIFKSSKLYYRYMGSLTAPPCTEGIIWTINKKIRTVSRGQVKLLKNSVLKYYAKRNARPVQILNQREIELYEPKAESKPHY 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04338 277 ProSiteProfiles Alpha-carbonic anhydrases profile. 31 268 IPR001148 -
Trre13g04338 277 Pfam Eukaryotic-type carbonic anhydrase 41 265 IPR001148 -
Trre13g04338 277 ProSitePatterns Alpha-carbonic anhydrases signature. 127 143 IPR018338 GO:0004089|GO:0008270
Trre13g04338 277 SMART Carb_anhydrase_2a 35 267 IPR001148 -
Trre13g04338 277 Gene3D Alpha carbonic anhydrase 30 274 IPR036398 -
Trre13g04338 277 SUPERFAMILY Carbonic anhydrase 31 267 IPR036398 -
Trre13g04338 277 PANTHER CARBONIC ANHYDRASE 31 262 IPR023561 GO:0004089|GO:0008270
Trre13g04338 277 CDD alpha_CA_prokaryotic_like 42 266 IPR041891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04338 Trre-Chr13 50966043 50968362 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04338 K01674 - gmx:100799362 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g02385 1 19217986 19220687 Trre13g04338 13 50966043 50968362 PCT