Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02249 ATGGAAAAGAAACGAAAGATTGTGCAGTATAGGGAGAAGTTGGATAGGACTCTTGCCTCACCTGATCTTACAAATGTTGAGATACTAAAAAATCTTGTAAAAAGCCAACTCCTACCGTCATCAGAATTAGAAGATGAAGGATATAAGGAGAAATTAGTAGAACATAAGACTGCAGAAATATCTAACTTTCTTGATATGTTAAGGAGTACTTCACACAATGATTGGAAACTAAAACAGGATGGCGAAGAGTTCCGTGTTATGTATCGTGAAGGACCGGAGGGAACTCCCTATCATACAATGCTAGTGGAAGGCTTTGTGGATGCACCTGTTGATGTTTGTTTATGTATCTCATGGCAGACATCCCTTTACAAAAAATGGTGGCCTCAGTCTACTATTCCTGCTTTCAAAATCTTATCATGTAAATGTTTACAGAAGGTCCAGATTGGGGAACAAATATCACTAGTGAGGATGAAGGTTTCATGGCCTCTGTCTTTGAGGGAAGCTGTAGTGCACTATTATCTGTTTGAGTACTTTCAAGATGACTTAATAGTTGTTCTTACGAATTCGGTCTCGGAGTCAAAGAGTGTCGCGGGGACCATTCCTGGTTTCAACAGTGACGCAATTCCTGAAGAAAAGGATGTCGTGAGAGTTGATTTAGTGGGAGGCTTTGCTTTGCAAAAGTTGACTTCAGAAAGAAGTTATTTTCGGACAATAGCAAATATGGATGTAAAGGTGGATTTTGTTCCTCCATCCTTGATAAACTTTATTTCAAGACAGCTCATTGGCAATGGTTTCAGACTTTATCAGAAGGTTGTTGCTTCTGTGATGAGCCATGATAAAGAAGAATTCAGCAATGCCTTGGGGGATCCATTGTATGCTAGAATTCGCGAGGCTCTATATAGCACTACTACCAGTGGATCAGAGGATGTGAATAGCACAGAGCTTCAGCAAGTTGCAAGAATTCATCCTGCTGAAGGTCTTGTTGAAAATAAGCAAGGTGGCGAAAATGATGTATCCAAAGAGGATAAAAGAAATCAATGTTCAAATAATTTCACATCATTGACAATGGATGCAACAGTACTAGAAGATGGGAAAGTATTTGGTGAGATTGTAGAATTAGGTAAGGAAGAGATTATGCAAAGTGTGGAGGATGTTGACAAAGTAAATGGAATTTTAGATGAAGTTGGTCCAATTGTACAAAAAGGCAAGAGGAGTGTATTTATCCGCTCGGATGTCGAACAAGCTCTAGAAACATTAGAGAAGGCCATTTCAATGGTAAGAGAATACCGGTTTCATGTCGATACGGCCTCTTCTAGCTTTGCCAAAGAAGAGTCCCCTTGCATGAAAAAACATGGCAGGGTTAATTCATATTCCACAACAAATTTTAAACCTTGTGATAAAAATGAGATTAGTGTTGAGGTACCAAATAATGATATACAGGAGGGAACTTCAGAAGAAGCACCTTGGACTAACTCTGACATCCAAAACTTAAGGTACACCGGGATAAATCCTAACAAAGTAATTCCTACTTTATCAGAGCAGAGTCTTTCAAGAATTACTGAGGCAAGCCAGGTTGGTTCATATTCTTTGGAAAGTCGAGCAATTATGGACCAGACAACATGCCAAAACAAGCCATTAAACACTAATTTGGTCCAAGAAATGTCTTCAAATGACAAAGCCAAATCAAGAAGGCAGAAAAAATTGAACACCAATGTGACTCAAGGTATGTCTTCAAATGCACCAAAGAAGTTGAGCAGACATAAAAGATATCAAAGATATCTGTGCTGTAGTTTTCCACATTAA 1803 0.3877 MEKKRKIVQYREKLDRTLASPDLTNVEILKNLVKSQLLPSSELEDEGYKEKLVEHKTAEISNFLDMLRSTSHNDWKLKQDGEEFRVMYREGPEGTPYHTMLVEGFVDAPVDVCLCISWQTSLYKKWWPQSTIPAFKILSCKCLQKVQIGEQISLVRMKVSWPLSLREAVVHYYLFEYFQDDLIVVLTNSVSESKSVAGTIPGFNSDAIPEEKDVVRVDLVGGFALQKLTSERSYFRTIANMDVKVDFVPPSLINFISRQLIGNGFRLYQKVVASVMSHDKEEFSNALGDPLYARIREALYSTTTSGSEDVNSTELQQVARIHPAEGLVENKQGGENDVSKEDKRNQCSNNFTSLTMDATVLEDGKVFGEIVELGKEEIMQSVEDVDKVNGILDEVGPIVQKGKRSVFIRSDVEQALETLEKAISMVREYRFHVDTASSSFAKEESPCMKKHGRVNSYSTTNFKPCDKNEISVEVPNNDIQEGTSEEAPWTNSDIQNLRYTGINPNKVIPTLSEQSLSRITEASQVGSYSLESRAIMDQTTCQNKPLNTNLVQEMSSNDKAKSRRQKKLNTNVTQGMSSNAPKKLSRHKRYQRYLCCSFPH 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02249 600 Gene3D - 72 280 IPR023393 -
Trre1g02249 600 PANTHER POLYKETIDE CYCLASE/DEHYDRASE/LIPID TRANSPORT SUPERFAMILY PROTEIN 1 545 - -
Trre1g02249 600 SUPERFAMILY Bet v1-like 62 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02249 Trre-Chr1 17953385 17957842 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02249 - - psat:127085934 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04575 13 53254953 53258291 Trre1g02249 1 17953385 17957842 PCT