Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04575 ATGGAGAACAGGAAAAATATTGTGCAGTATAGGGAGAGGTTGGATAAGACTCTTAGCTCATTTGATCTTACAAATGATCAGAAACTTAAATCGCTTGTCGAAAGTCAATTCTGTCGTTCTTCACAGTCAGAGAGGGAATTGGAAGGATATGAGGAGAAACTAGAAATTAAGACTGCTGAGTTATCAAACTGTCTTGATATGATGAGAACTGTTTCTGCCGGTGAAAACGGAGAATCTAGTACATCGCACGCCGATTGGAAATTAACACAAGATAACGAGGATTTCCGTGTTATGTATCGCGAAGGACCAGAGGGAACTCCCTATCATACATTGATGGTTGAAGGCTATGTAGATGCACCTGTTGATGTTTCTTTATGCCTCACATGGGAGTCACCCCTTTATAAGAAATGGTGGCCTCAGTTTACTGTTCCGACTTTCAAAGTTACGGCGTCTGATTGTTTGCAGAAGGTTCAAAATGGAGAACAGATAGTACTAGTAAGGATGAAGCCTCCATGGCCACTGTCTACAAGGGAAGCTATAGTTCATTTTTATCTGTTTGAGTACTTTCAAGATGACTTGATAGTTATTCTTTTGAAATCGGTTACTGAGTCAGAGAAAACTAATGAGACTATTGATGGTTCCAAAAATGATGTGATTCCTGAAGCAAAGGGTGCTGTGAGAATTGATGTGTTGGGAGGTATTGTTTTGCAAAAGGTGACATCTGAAAGAAGTTATGTCCGGGCAATAGCGAATTTGGATATAAAGATTGATTTTATGCCTCCATCGCTTATAAATTTCATTTCAAGGCAAATCATTGGCAGTGGTTTCAGACTTTTTCAGAAGGCTGTGGCTTCTAAGATGAACGGCGACAAGGAATTCAGTAAGGCCTTGACAGATTTGTTGTTTGTTAGAATTCGTGAAGCTCTATACAGTACCGATGAATCAAATGCTATGGACGAGGAGGAGCTTAAGCAAGTTGCAAGCATTTTTCCTGCTGAAGAACTTAGTCAAAGTAATCATGATCGGGCAAACGATATGTCTCGGAAGGACAAAAGCAACCAAAATGCAAATAATGATGCAAGCAGCGAAGAGATTGCACAAAGTAAGGAGAATGTAACCAAAGTGCACGACATTCCAATTGAGGAAGGTGATACATCTATTGTACTAAAGGGAAATCGGAATTGGGAGATTGTTGATGCAGACAATGAAGAGATTGTAGAAGGAAATATTGGTGAGATTGTACAAATTGAAAAGGATGCAAACAAAATTCATGGCATTCCATTTGATGAAGATGATACATGTGTTGTACTAAATCGAAAGAGTAATTGTGAGATTGTCGATGATGACAGTGAAGAGATTGTAGAGGAACATATTGAAGAGATGGTACAGATTGAAAAGGATGTAAAGAAAATAAATGACATTTCAAATGATGAAGGTGATACATCTATTGTACTAAAGGGCGATAAGAATTGTGAGATTGTCGACGCAAATAGCGAAGAGATTGTAGAAGCAAATATTGAGCATGATGATGATACAAAAGGTGTACTGAAGAGAAAGAGTAATGTAAATATCAGCTCAAATGTAAGGCAGGCTTTAGAAACATTAGAAAGGGCTATTTCATCTGTTAGGAAATATGGATTTCACTCGCGCAGATTCTCTTTTAGCTTTGCTAATGAAGCAACCATCTGCAAAGAAAAAGGTGGAGAATTCGATCCACATTCTGCAAAACTTTTTCAGCCATCTGTGAAAAATGATGTCAGTGTCGAAGAACCAGGCAACAACAATATACCACGCGAAAGTTCAGACGACCTTTATGAAATTCAAAACTTCAGGCATACCGAAACAAATCCTAACACGAAGGAAGTAAATTTTAAGAAAGTAGTACCGGCTTTTCCGAATCAGAATCTCATTGAAGCAAGCCAGGTTGATTCATATACAGGACAAGATTTGTCTTCAGGTGAACCAATAAAGTCAAGCAGGCAGAAAAATATAAACAACCTTGTTACTCAAGGTATCTCTTCAGATGTACCAAAACAGTTAAGCAAGAAGAAAAATTATAGATACTGTTGTTTTATGCATTAG 2082 0.3804 MENRKNIVQYRERLDKTLSSFDLTNDQKLKSLVESQFCRSSQSERELEGYEEKLEIKTAELSNCLDMMRTVSAGENGESSTSHADWKLTQDNEDFRVMYREGPEGTPYHTLMVEGYVDAPVDVSLCLTWESPLYKKWWPQFTVPTFKVTASDCLQKVQNGEQIVLVRMKPPWPLSTREAIVHFYLFEYFQDDLIVILLKSVTESEKTNETIDGSKNDVIPEAKGAVRIDVLGGIVLQKVTSERSYVRAIANLDIKIDFMPPSLINFISRQIIGSGFRLFQKAVASKMNGDKEFSKALTDLLFVRIREALYSTDESNAMDEEELKQVASIFPAEELSQSNHDRANDMSRKDKSNQNANNDASSEEIAQSKENVTKVHDIPIEEGDTSIVLKGNRNWEIVDADNEEIVEGNIGEIVQIEKDANKIHGIPFDEDDTCVVLNRKSNCEIVDDDSEEIVEEHIEEMVQIEKDVKKINDISNDEGDTSIVLKGDKNCEIVDANSEEIVEANIEHDDDTKGVLKRKSNVNISSNVRQALETLERAISSVRKYGFHSRRFSFSFANEATICKEKGGEFDPHSAKLFQPSVKNDVSVEEPGNNNIPRESSDDLYEIQNFRHTETNPNTKEVNFKKVVPAFPNQNLIEASQVDSYTGQDLSSGEPIKSSRQKNINNLVTQGISSDVPKQLSKKKNYRYCCFMH 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04575 693 Gene3D - 84 291 IPR023393 -
Trre13g04575 693 MobiDBLite consensus disorder prediction 334 377 - -
Trre13g04575 693 MobiDBLite consensus disorder prediction 350 368 - -
Trre13g04575 693 Coils Coil 454 474 - -
Trre13g04575 693 SUPERFAMILY Bet v1-like 81 284 - -
Trre13g04575 693 PANTHER POLYKETIDE CYCLASE/DEHYDRASE/LIPID TRANSPORT SUPERFAMILY PROTEIN 1 665 - -
Trre13g04575 693 Coils Coil 40 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04575 Trre-Chr13 53254953 53258291 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04575 - - mtr:25499510 967.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04575 13 53254953 53258291 Trre1g02249 1 17953385 17957842 PCT