Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02244 ATGGAATCTGAAAATGGAGTTGTTATGGAAGATGAGAAACATGTTATTGGAGAAACAAATAAGGAGAGCATACATAAAGAAATTGAAGAGAATTTGAAGGGAGAAATTCAACCCAAGAATGAAGTATCTCAATCCATAGTAGAAATTGATGGAAACAATTCTGCAGTTAGTAAAATCTCCAAACATGCCAAGGAACATGGTTTCAAAAGTGGTGCTACTTCAAAGAACACTAAATCTGCTACAAAAGCTAAACCAAATTTGAAGGCAATAACTTCATCATCTCAAACACAAAGACAACAAAACCTATCCAAGAGCCTTACATTCCCATCGAAAATAGCTCGTGTCGATGCTATGAAGAAAAGCACTGATGGAATTCTTCTGAAGAAAGAAAACAAGAATGTTCAAGCTGTGGCTTCAACTATTCATTCAAGAAAGTTAACAAACTCAAAAGTGAACTCAAAGGAGACAAAAACAAACCATGGAAATTCTAAACTAATGGCTTCTTTAACATCCAATAATAGCTTTAAAAGTTCTGAGCTTGGAAGGACTTCCAATGTGAATGCAGTTGCCAAGAGCCATACATCCGAGGCATCGTTACCTATTGATCAGAATTCAAACCCTTCAAAAAGTGAAAAGCCGAATAAAGAAGACGATGATGTTCATTCTACAACTTCAAGTCTTACTCCTCGTAGGAAAAGCAACGGTTTTGGATTTTCGTTTAGATTGGAAGAACGAGCTGAAAAAAGAAAAGAGTTCTTCTCAAAGTTGGAAGAGAAAATTCAAGAAAAGGAAGCAGAGAAAAGCAATCTGCAAGAGAAATCGAAGGAAAGCCAGGAGGCAGAGATCAAGAAATTAAGAAAGAAGATGACATTCAAAGCAGCTCCAATGCCAAGTTTTTATAAGGAACCTCCTCCAAAAGTTGAACTGAAAAAGATACCTACAACACGCCCAAAATCACCGAAGCTCGGAAGAAACAAGGGATCTGTTGTGAACAATAACTCAGAAGATAAATCTAGTTCTATCTTACATGAAAAGCAACAACAGAATGATTCAACCAAGGCAAAGATAAAGGGTTATAAAGATGTGAGTTCAAAGAAACCAATAAAAAAAACTCAAGCCAAGGTACAATCTAAGGAAATTGCAGTAACAAAAACAGAATCAGATTCTGCAAAATCTACTGCAAATGAGGTCTCAATAATAATCAACCAAGATGCAAAAGAAGATATAATAGAAGGCATTGAAGAATGTAAAGATCAACCTGTTGACATTTCTGAATATCAAAATGGGATGGAACTAGAATCACAAAATGATGTTGATCATAACAGTTCACTGGTTTTGAATGCATCCACACCAGAAATTGTATCCTATGAAGTTATTGTTGGAGTGTAG 1389 0.3564 MESENGVVMEDEKHVIGETNKESIHKEIEENLKGEIQPKNEVSQSIVEIDGNNSAVSKISKHAKEHGFKSGATSKNTKSATKAKPNLKAITSSSQTQRQQNLSKSLTFPSKIARVDAMKKSTDGILLKKENKNVQAVASTIHSRKLTNSKVNSKETKTNHGNSKLMASLTSNNSFKSSELGRTSNVNAVAKSHTSEASLPIDQNSNPSKSEKPNKEDDDVHSTTSSLTPRRKSNGFGFSFRLEERAEKRKEFFSKLEEKIQEKEAEKSNLQEKSKESQEAEIKKLRKKMTFKAAPMPSFYKEPPPKVELKKIPTTRPKSPKLGRNKGSVVNNNSEDKSSSILHEKQQQNDSTKAKIKGYKDVSSKKPIKKTQAKVQSKEIAVTKTESDSAKSTANEVSIIINQDAKEDIIEGIEECKDQPVDISEYQNGMELESQNDVDHNSSLVLNASTPEIVSYEVIVGV 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02244 462 PANTHER PROTEIN WVD2-LIKE 4 65 451 IPR044833 GO:0008017
Trre1g02244 462 Pfam Targeting protein for Xklp2 (TPX2) domain 238 307 IPR027329 -
Trre1g02244 462 Coils Coil 246 288 - -
Trre1g02244 462 MobiDBLite consensus disorder prediction 1 22 - -
Trre1g02244 462 MobiDBLite consensus disorder prediction 261 288 - -
Trre1g02244 462 MobiDBLite consensus disorder prediction 338 368 - -
Trre1g02244 462 MobiDBLite consensus disorder prediction 209 225 - -
Trre1g02244 462 MobiDBLite consensus disorder prediction 145 208 - -
Trre1g02244 462 MobiDBLite consensus disorder prediction 261 376 - -
Trre1g02244 462 MobiDBLite consensus disorder prediction 145 241 - -
Trre1g02244 462 MobiDBLite consensus disorder prediction 60 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02244 Trre-Chr1 17916257 17918954 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02244 - - psat:127098237 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04579 13 53286252 53289275 Trre1g02244 1 17916257 17918954 PCT