Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04579 ATGGAATCTGAAAATGAAGTTGCTATAGAGGAAGAGAAACGGGTTATTGGGGTGACATCTAAGGAGAATATAAACAAAGAAGATGCAAACATTTGTGGTGCAGAAATTCAAAATGAGAATGAAGAATCTAAGGTTGAAAGCCACATTTCTAATACTGACACTGTTGAAGTTGAAGCCTCTAAAAATTCAAAACTTGCCAAGGAAACAAAGAGCAAGGAAAGTGTTGCTTCCAAGAACAACAAATTTGTCAAAGATAAATCCAATTTGAAAGGCACAACTTCAATATCTAGAAAACAAAGGTCAACACTTTCTCAGAGTTTGTCTTTCCCAGCCAAATCAGCTAGAGAAGATTCTATACATAAAAGCATTGATGGGAGTCTTGTGAAGACAAAAGCTAAACATGTTCAAGCTTCAACTCTTCATCATTCAAACAAGTCCACAAACTTTGAAGGAAAATCAAATGAGGGAAAAAGAAACACTGAAGGTTTTAAAAAGAGGACTACTTTGATATCAATGCCTGGTTTGAAACGTTCTGTGGCAGTCAACAAAAGCCACACATCTGAGGCATCTCTACCTGTTGATCAGATATCAAACTCATCAAAATCTGCCAAACCAAGTAAAGAGGATGATGATTCTCACTCGACGACTTCAAGTGCTGCTCATCGTCAGAGAAACATATGTTCTGGATTTTCATCAAGATTGGAAGAAAGAGCTGAAAAGAGGAAGGAGTTTTTCTCAAAGATAGAGGAAAAAGTTCTAGCCAAGGAGGCAGAAAAAACCAACCAACAAGTCAAATCAAAGGAAAACCAAGAGGCAGAGATCAAACAATTGAGGAAGAGCTTAACTTTCAAAGCCACTCCAATGCCAAGTTTCTATAAGGAACCACCTCCAAAAGTTGAGCTCAAGAAGATACCAACAACCAGGCCGAGATCTCCAAAGCTTGGAAGACACAAAGAGTCTTGCACAAGTCCACGTGGGAATCAACAGCAGAATGACTCAATCAAGGCAAAGACCATAATAATAAAGGGTCATAATAAAGAGGTGATTTCAAAGAAACCAATGAGAAAAACACAAGCCAAGGTGAAGTGTCAGGAAAATGCAACCAAAGGAAGCAATGAAGAATGCCAACCTACACATGTAAACAATTCTGAATTCAAAAATGACATTGAGCAACAATTTGAGACAGATCTTCCTGCAAATGATTATGCACAGGCTTTAGATTCTACTACACTTGAGTTTCCATCATGTGAGGTTACTGTTGGAGTGTAG 1269 0.3806 MESENEVAIEEEKRVIGVTSKENINKEDANICGAEIQNENEESKVESHISNTDTVEVEASKNSKLAKETKSKESVASKNNKFVKDKSNLKGTTSISRKQRSTLSQSLSFPAKSAREDSIHKSIDGSLVKTKAKHVQASTLHHSNKSTNFEGKSNEGKRNTEGFKKRTTLISMPGLKRSVAVNKSHTSEASLPVDQISNSSKSAKPSKEDDDSHSTTSSAAHRQRNICSGFSSRLEERAEKRKEFFSKIEEKVLAKEAEKTNQQVKSKENQEAEIKQLRKSLTFKATPMPSFYKEPPPKVELKKIPTTRPRSPKLGRHKESCTSPRGNQQQNDSIKAKTIIIKGHNKEVISKKPMRKTQAKVKCQENATKGSNEECQPTHVNNSEFKNDIEQQFETDLPANDYAQALDSTTLEFPSCEVTVGV 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04579 422 MobiDBLite consensus disorder prediction 114 128 - -
Trre13g04579 422 MobiDBLite consensus disorder prediction 321 336 - -
Trre13g04579 422 MobiDBLite consensus disorder prediction 39 233 - -
Trre13g04579 422 MobiDBLite consensus disorder prediction 86 112 - -
Trre13g04579 422 Coils Coil 250 277 - -
Trre13g04579 422 MobiDBLite consensus disorder prediction 60 85 - -
Trre13g04579 422 MobiDBLite consensus disorder prediction 361 380 - -
Trre13g04579 422 Pfam Targeting protein for Xklp2 (TPX2) domain 233 299 IPR027329 -
Trre13g04579 422 MobiDBLite consensus disorder prediction 296 320 - -
Trre13g04579 422 MobiDBLite consensus disorder prediction 203 217 - -
Trre13g04579 422 MobiDBLite consensus disorder prediction 279 337 - -
Trre13g04579 422 PANTHER PROTEIN WVD2-LIKE 4 65 400 IPR044833 GO:0008017
Trre13g04579 422 MobiDBLite consensus disorder prediction 180 202 - -
Trre13g04579 422 MobiDBLite consensus disorder prediction 351 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04579 Trre-Chr13 53286252 53289275 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04579 - - mtr:25499518 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04579 13 53286252 53289275 Trre1g02244 1 17916257 17918954 PCT