Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02234 ATGGATTCCGAAAGTGTTGCATCTCCCAAGGATTTGTTGAAATGTTGCGATTGTGGATGTAGTTGCTCTTTGTTGGATCAAAATTCTGCAACTTGGATGCGTTCCGTTAAACGGAAGCACGATGAGTTTAAACTGGAAAATCAATTACCGGTGCCATCGGTTGCGCGGGTTGAAATTGGGAATGAATGTGTAGCCTTACGCGAGATGGTTGGTGTGCAACAGAGAACTATTCAAGATTTGAATGAGGAATTGGATGAGGAGAGAAATTCTTCGTCCACGGCTGCAAACGAGGCAATGTCTATGATCTTGAGGTTGCAGAGGGAAAAGGCAGAGATTCAAATGGAAGCTCGTCAATTCAAGCGTTATGCAGAGGAGAAAATGATGCATGATCAAGAGGAACTTATGTCTTTGGAAGATTTGTTGTACAAGAGAGAACAGATAATTCAGTCGCTTACGTGCGAAGTTCAGGCTTACAAGCATAGAATGATGAGTTTTGGATTCACTGAGGATGAGTTGGAGGGTGATCAATATGACATTCCTCCCTATGAATACCCTCCTTTAAAATGTAATGTCATGCATAATGCCATGGATGCTGATAATGACGATACTGATGTTGAGAAATATGTTTTTGCCGAAACTCCAAACGACCGTTTGAGGAACTTGGAGAATAGGATTTCTCAAATGGAGAAAAGTCCTACTTACAGCCAGAAGGATGGAGATTTTATAGGAAAAAATGTTCTAGAGAAAGTAATTGTTGGACAATCTCCAAAGTTGACGAGGCTCTCAAGGAAAGTTTCCTCTGACTCATCAGTGTTCGGTAGAGAAATCGGTTCTGAGTTCCCTGTGGAGTCTCCGATCAACAATAGAAACTATAAGAAGGATTATTTCTCTCAGTCAGAGGACCATTCTAATTTGAAGAAGGTAGATAACGCTTCGGAAGGTGATGATACGAGTGACAGAATTTATACAATTGACTCTGTTCAATCTGGGGCACCATATAATGGCTTTACAGGTTCCAAAGCTGGAGCTTTCGAAGATTATGCAACCAGTCCAAAGGAATCGGGGAATCATCATGCTGAATTTGAGGATCCCTACATAAAGAAGCTTTACACAAGGCTTCAGGCACTTGAAGCCGATAGGGAATCAATGAGGCAGGCAATCATTTCAATGAGCACAGATAAAGCACAGGTTGTGTTATTGAAGGAGATAGCTCAGCATTTGTGCAAAGAGATGTCACCGCAAAGAAAAATGAGTACCAGCAAGCCATATGTTGCCACAAGAACTCCCTTCTTGTCAATTTTTAAGTGGGTCACATCAGTTGTTCTTTGGAGAAAGAAAGCGCAAGAAAGCAAGTATATGTTAGGGGTACCAGCTGACAGTATGGGATTGCTGTTGCTCCTGGACAAAAGAACAAATGCAAGGCCATGGAGATGTATTTCAAGTACACAAGTAGGAGATTAA 1461 0.4155 MDSESVASPKDLLKCCDCGCSCSLLDQNSATWMRSVKRKHDEFKLENQLPVPSVARVEIGNECVALREMVGVQQRTIQDLNEELDEERNSSSTAANEAMSMILRLQREKAEIQMEARQFKRYAEEKMMHDQEELMSLEDLLYKREQIIQSLTCEVQAYKHRMMSFGFTEDELEGDQYDIPPYEYPPLKCNVMHNAMDADNDDTDVEKYVFAETPNDRLRNLENRISQMEKSPTYSQKDGDFIGKNVLEKVIVGQSPKLTRLSRKVSSDSSVFGREIGSEFPVESPINNRNYKKDYFSQSEDHSNLKKVDNASEGDDTSDRIYTIDSVQSGAPYNGFTGSKAGAFEDYATSPKESGNHHAEFEDPYIKKLYTRLQALEADRESMRQAIISMSTDKAQVVLLKEIAQHLCKEMSPQRKMSTSKPYVATRTPFLSIFKWVTSVVLWRKKAQESKYMLGVPADSMGLLLLLDKRTNARPWRCISSTQVGD 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02234 486 PANTHER BNAANNG28530D PROTEIN 60 416 - -
Trre1g02234 486 Coils Coil 70 125 - -
Trre1g02234 486 MobiDBLite consensus disorder prediction 297 319 - -
Trre1g02234 486 Pfam Zein-binding 65 155 IPR007656 -
Trre1g02234 486 ProSiteProfiles GTD-binding domain profile. 61 159 IPR007656 -
Trre1g02234 486 Coils Coil 366 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02234 Trre-Chr1 17804101 17807012 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02234 - - gmx:100814833 744.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g02234 1 17804101 17807012 Trre1g02234 1 17804101 17807012 ECH
Trre13g04596 13 53389693 53391949 Trre1g02234 1 17804101 17807012 PCT