Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04596 ATGGATTTGGAATGTTCCGACGATTCTTTAAATGCCGAAACATGCAAATGTCGCCACTGCAATTGCGGCTGCTCTGAACGGAGAACGGATTGGATTCGTTCGGTGAAACGGAAACACGATGAGTTGGAAAAGGTGAGAAAATTGAACGGCGGTGGTGATGGCGTCGTTCGTGTTGAAATTGGGGATGAATGTGTTGCCTTACGACAGGCGGTTAGCGGTCAGCAAAAAGCGATTCAGGATTTGTATTCTGAATTGGAGGAGGAGAGGAATGCTGCTTCATCCGCGGCGAATGAAACAATGTCGATGATATTGAGGTTGCAGACTGAGAAGGCTGAACTTGAAATGGAAGCGAGGCAATTCAAGCGATTTGTTGAGGAGAGAACGAGTCATGATCAGCAGGAGATTTTAGCTTTGGAGGAATTGTTGTATAAACGGGAACAAACGATTCATTCGCTTACGTGCGAAATTCAGGCTTATAAACATAGATTGATGAGTTATGGCTTATCTGAGTCAGAGGTGGATGGTGATTATGATTTTCCACCTTATGAGTATCCTCCTTTGAAATGTAATGTAATGCACGCTGTCGCGGACACTGAGAATGATGATGTATTTGACGTTGATGTTGAGAAGTATGTGTTTGGGGAAACTCCTAGGGATCGTTTGAGGAGTTTGGAGAACAGGATATCTCAAATGGAGAGAACTCCAACTTATAGTCAGATGGAAGGTGAATTCGGTACAAAAAATATTATAGAGAAGGTAATAGTTGGACAATCTCCTACGGTGAATAAACATTCGAGGAAATTTTCATGTGACTCGTCTACGTTTGGCCCCGAGTTTGTGTCGGATTCTCCCAGATTCAATGGCAGCATTAAGAAGATGAATAATGGGTCAGAGGATTTCTCCAATTTTAAAAAGATGGATAATGTGTCTGAGGCTGGTGATAATATGACTGATAGAGTTTACACTGTTGACTCTGAATTCAAAGGTGGAGTTGGTGGTTATGATGAGCATGTATCAACTCCGAGGGAGTTTGGAAATCAGGGCGATTTTGAAGATCCATATGTAAAGAAGCTTTACATACGGCTTCAAGCACTTGAGGCGGATAGGGAATCAATGAGGCAGGCAATCATTTCGATGCGTACTGATAAAGCGCAGCTTGTTTTGCTCAAGGAAATAGCTCAACATTTGTGCAAAGACATGTCAAATCAGAGAAAAGTTACCGTGAAAACCTTTGTGGGCGGCTTCTCATTCTTCACAATCTTTAAGTGGGTTGCTTCAATTGTTTTATGGAGAAAGAGAGGTCATCAAATCAAGTATATGTTTGGTCTACCATCTAGCAGTTCCGGCTTGCTAATGCTCCTCGACAAAGGACCTAATGTAAGGTCGTGGAGATATGTTTCAAGGGTTCAATTGGGAGAATAG 1422 0.4233 MDLECSDDSLNAETCKCRHCNCGCSERRTDWIRSVKRKHDELEKVRKLNGGGDGVVRVEIGDECVALRQAVSGQQKAIQDLYSELEEERNAASSAANETMSMILRLQTEKAELEMEARQFKRFVEERTSHDQQEILALEELLYKREQTIHSLTCEIQAYKHRLMSYGLSESEVDGDYDFPPYEYPPLKCNVMHAVADTENDDVFDVDVEKYVFGETPRDRLRSLENRISQMERTPTYSQMEGEFGTKNIIEKVIVGQSPTVNKHSRKFSCDSSTFGPEFVSDSPRFNGSIKKMNNGSEDFSNFKKMDNVSEAGDNMTDRVYTVDSEFKGGVGGYDEHVSTPREFGNQGDFEDPYVKKLYIRLQALEADRESMRQAIISMRTDKAQLVLLKEIAQHLCKDMSNQRKVTVKTFVGGFSFFTIFKWVASIVLWRKRGHQIKYMFGLPSSSSGLLMLLDKGPNVRSWRYVSRVQLGE 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04596 473 ProSiteProfiles GTD-binding domain profile. 62 160 IPR007656 -
Trre13g04596 473 Coils Coil 355 382 - -
Trre13g04596 473 PANTHER BNAANNG28530D PROTEIN 61 405 - -
Trre13g04596 473 Pfam Zein-binding 66 156 IPR007656 -
Trre13g04596 473 Coils Coil 71 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04596 Trre-Chr13 53389693 53391949 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04596 - - aprc:113861614 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04596 13 53389693 53391949 Trre13g04596 13 53389693 53391949 ECH
Trre13g04596 13 53389693 53391949 Trre1g02234 1 17804101 17807012 PCT