Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02190 ATGCCAGGATTACCCCAATTCAGTAATGGCTCATCGCCATCGATTAACTCTCTTTCTGCCAATGGATTTTGGTCCAAGAATCGTGATGATGTTGGTTACAATCAGCTCCACAAGTTTTGGAGTGAGTTGTCGCCACAAGCTCGGCAGGAACTCTTGAGGATAGACAAGCAAACCCTTTTTGAGCAAGCGCGAAAAAATATGTACTGCTCCAGATGCAATGGATTGCTTCTTGAAGGCTTTTTGCAGATCGTTATGTATGGAAAATCTTTGCAGCAAGAAGGAACATGTGTTCAGTTTCCTTGTGGTAGACCTGGGGGTTTCAAAAATCAAAATAATGGTGGATCGTCGATTTCCAATGGGGTCCTAGATGACATTCAAGATCCATCAGTCCATCCTTGGGGAGGTTTGACAACGACGCGTGAGGGTTCACTCACACTTATGGATTGCTACTTGTATTCAAAGTCTCTGAAGGGACTGCAAATTGTATTTGACGGCGCACGCGCTAGGGAGCGGGAAAGAGAACTGCTTTATCCCGATGCCTGTGGTGGTGGAGGCCGTGGCTGGATAAGCCAAGGAATAGTGAGTTACGGTAGAGGGCATGGGACAAGGGAAACCTGTGCCCTGCATACTGCCAGACTTTCATGTGACACACTGGTGGATTTTTGGTCGGCACTGGGTGAGGAGACAAGACAATCTCTTCTAAGGATGAAGGAAGAAGATTTTATAGAGAGACTCATGTTCAGGTTTGATAGCAAGAGGTTTTGCAGAGATTGTAGAAGAAATGTTATTCGAGAATTCAAGGAGCTAAAAGAACTGAAGCGCATGCGTAGAGAACCTCGTTGCACCAGCTGGTTTTGTGTTGCTGATACTGCATTTCAGTATGAGGTATCTGATGACTCAATTCAAGCAGATTGGCGCCAAACATTTGCAGATACTGTAGGATCGTATCATCACTTTGAGTGGGCTGTGGGGACAACCGAAGGAAAATCAGACATTTTGGAATTTGAAAATGTTGGAACAAATGGATGTGTTCAAGTCAGTGGCCTAGATCTTGGTGGCTTGAGTGCATGCTTCATTACACTTCGAGCTTGGAAACTAGATGGCCGATGTACTGAGTTTTGTGTTAAAGCTCATGCATTAAAGGGCCAAGAGTGCGTACATTGCAGGCTAATTGTAGGGGATGGTTATGTTACCATCACAAAAGGAGAAAGTATAAAAAGATTTTTTGAGCATGCTGAAGAGGCGGAAGAAGAAGAGGATGATGATTTGATGGACAAAGATGGGAATGAGCTTGATGGAGAATGCACTCGTCCGCAAAAGCATGCAAAGAGTCCTGAACTTGCTCGAGAATTTCTTCTAGATGCTGCTACAGTTATATTCAAAGAGCAGGTAGAAAAGGCTTTCAGAGAAGGAACAGCACGTCAAAATGCGCATAGCATATTCGTTTGTCTTGCACTAAAATTGCTGGAGGAACGAGTTCATGTAGCATGCAAAGAGATCATTACATTAGAGAAGCAGACAAAACTTCTTGAGGAAGAAGAAAAGGAAAAACGTGAAGAAGAAGAGCGCAAGGAGAGGAAAAGAGCAAAAGAAAGAGAGAAAAAACTTAGGAGAAAGGAGAGACTAAAAGGAAAGGAAAAAAATAAAGAGGAAAAGTGTTCTGAGTCCATTGATGTTCCTAGCTCTCCTGAAGCAACAAAGAAAGAACTGCCTGCACCTGCTGATACAGAGCAAAATAACGCTATTACATGCAGGAATTCTGTTATTGCAACAGATGAGACTAATATATCACAGGATGATTATCCTAACATCCAAGATGAAGAGTTCTCAAGTGAGTGTAGTACTTTCAGAGCACAAGACCATGCTTATGATGACTATGATGGAGACATTGCAAATGCACATGAAACGAATGGTTCTTCCAAAGTTGAACAACCGAAGTTTTATCGTCAAAGACTTAGATATAGGAAAGAGTTTCAAGTCGATATGTCTTCAAAGTGGTCTGACAGGCACCATAATGCAGTTGTTTACGAAAATGGTGGAATGGTAGGAAGATCTGAGCCAAGACACTATGGAGATAACTTTGGAACATCTTCCAGGGGAATCAGTGGTGGATTGAACAGACAATCAAAAATAAATGTTCCGAAAACCAATGGTCGTAACGTTGGTCATAAGTGTAATGACAAGTTCTATAGTTCCAACTACCGGATGAGTGAAAAATATGATTTCCATTCTTGCAGCTGTAGTGTGAACAATAGAATGACCAGAGGTACTCGCGAGATGAAAGCCACTAGTGTGTCTGAATCTGCTGTAGATACATCTAGGCAGTTTTATCGTGGTAGTAAGTATAATCAGGGAGACTTAATGCATGAGAGTGGCGGAAGACCCAAAAGCAGAGTCTTCTCAGGGAACTATCCAAGTAGGGATATGCTTCAATCAAAGAAAGTTTGGGAGCCTACGGAATCACTCAATAAGTATGCACGTAGTAATTCAGACTCTGATGTTACGTTGAGGTCCACAGGTCAAGTATTACAGACGTTCGATCCAGTCAGGTCACCTGTTGATGAAGTTGATGATTCAGGTGAAATTGACAATGATGATAGTGATTTGAAGAGTGGTGGAATCACTCAAGGTTGTCAGAATGATCTTGATGCAGAAGCTGAAGGATCTTGCAGCTCCACAGAAATTGGATCTGAGGAACCGGAAATAAGTCCGCCGAGGAGATCAGCCATGAATAATTCTTCTGATCGCAGTCACGGTAGCATTTCTAGTTCCGATAACTGCTCATCATGCCTAAGTGAGGGCGATAATAATACAACCTCTTCAAACCGTGAAAATACAGAATTCTCAAATTCAGATTCTGAAGATGCTAGCCAAAAATACGAAGTAACAGATAGTTCAACCTGCGTTGACAATGGCGTGTCTGGCTGTTATGAACCTGAGATCGAGAAAACTCATGATGCAAATGGTGAGGGTTTGTCAAGCAGGTCACTATCTGTTCCATCCTTGGATGCAGCAGAAAGTGAAGTGTTTGGGAGTCCTGTGTTAGATACTGCCCAAAGTTTTGAAAATGGTGTTTCTTTCACCAATGTATGTTCTCAAGCTGAAAGCATTCTACCTCCGATGCCAAACCGAAACATACAATTGCCTGTGTTTCAGACCCCTTCAGCGATGAGTTACTACCATCAAAACCCAGTTTCATGGCCAGCTGCTCCCGCTAATGGTTTGATGCCCTTTGTACACCCAAATCACTATTTATATACTGGCCCTCTTGGATATAACTTGAATGAGGACCCTCGGTTCTGCTTGCAGTATGGTTCCTTACAGCAACCAACACCCCAATTTAACCCTGCTGCAATTCCAGTTTATCATCCAGTTGCCAGAACAAACGGCTTAAATGGAGAGGAACTGAGTCAAATTTCTAAGCCGGCATCCATGCACGAGCGTTTTAATGAATCTATGGCAGAAAGGGTTGTTCCGGTTGCAGCTAATTCAAGAAAAGGACTGAACGGGGAAGGCCAACGTGGCAGCAATTCTGCCAAGTCACAAGATAGTAATGGTGGGTTTTCCTTGTTTCATTTTGGCGGGCCTGTAGCATTTTCAAATGAACGCAAAACAGCTCCTGCATCTTCAGAAAATGTTGGAGATTTCAACTCAAAAAGTTCGCCAGATCAAGTTGAAAAAGATCATGGTTGCAATAAGAAAGAGACTGCTTTCATGGAGGAGTACAACTTGTTTGCGGCGAGTAATACCTTAAGGTTTACAATTTTCTAA 3771 0.4264 MPGLPQFSNGSSPSINSLSANGFWSKNRDDVGYNQLHKFWSELSPQARQELLRIDKQTLFEQARKNMYCSRCNGLLLEGFLQIVMYGKSLQQEGTCVQFPCGRPGGFKNQNNGGSSISNGVLDDIQDPSVHPWGGLTTTREGSLTLMDCYLYSKSLKGLQIVFDGARARERERELLYPDACGGGGRGWISQGIVSYGRGHGTRETCALHTARLSCDTLVDFWSALGEETRQSLLRMKEEDFIERLMFRFDSKRFCRDCRRNVIREFKELKELKRMRREPRCTSWFCVADTAFQYEVSDDSIQADWRQTFADTVGSYHHFEWAVGTTEGKSDILEFENVGTNGCVQVSGLDLGGLSACFITLRAWKLDGRCTEFCVKAHALKGQECVHCRLIVGDGYVTITKGESIKRFFEHAEEAEEEEDDDLMDKDGNELDGECTRPQKHAKSPELAREFLLDAATVIFKEQVEKAFREGTARQNAHSIFVCLALKLLEERVHVACKEIITLEKQTKLLEEEEKEKREEEERKERKRAKEREKKLRRKERLKGKEKNKEEKCSESIDVPSSPEATKKELPAPADTEQNNAITCRNSVIATDETNISQDDYPNIQDEEFSSECSTFRAQDHAYDDYDGDIANAHETNGSSKVEQPKFYRQRLRYRKEFQVDMSSKWSDRHHNAVVYENGGMVGRSEPRHYGDNFGTSSRGISGGLNRQSKINVPKTNGRNVGHKCNDKFYSSNYRMSEKYDFHSCSCSVNNRMTRGTREMKATSVSESAVDTSRQFYRGSKYNQGDLMHESGGRPKSRVFSGNYPSRDMLQSKKVWEPTESLNKYARSNSDSDVTLRSTGQVLQTFDPVRSPVDEVDDSGEIDNDDSDLKSGGITQGCQNDLDAEAEGSCSSTEIGSEEPEISPPRRSAMNNSSDRSHGSISSSDNCSSCLSEGDNNTTSSNRENTEFSNSDSEDASQKYEVTDSSTCVDNGVSGCYEPEIEKTHDANGEGLSSRSLSVPSLDAAESEVFGSPVLDTAQSFENGVSFTNVCSQAESILPPMPNRNIQLPVFQTPSAMSYYHQNPVSWPAAPANGLMPFVHPNHYLYTGPLGYNLNEDPRFCLQYGSLQQPTPQFNPAAIPVYHPVARTNGLNGEELSQISKPASMHERFNESMAERVVPVAANSRKGLNGEGQRGSNSAKSQDSNGGFSLFHFGGPVAFSNERKTAPASSENVGDFNSKSSPDQVEKDHGCNKKETAFMEEYNLFAASNTLRFTIF 1256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02190 1256 Coils Coil 486 552 - -
Trre1g02190 1256 MobiDBLite consensus disorder prediction 1165 1185 - -
Trre1g02190 1256 PANTHER OS10G0105400 PROTEIN 17 988 - -
Trre1g02190 1256 MobiDBLite consensus disorder prediction 1201 1230 - -
Trre1g02190 1256 MobiDBLite consensus disorder prediction 512 529 - -
Trre1g02190 1256 MobiDBLite consensus disorder prediction 543 557 - -
Trre1g02190 1256 MobiDBLite consensus disorder prediction 695 719 - -
Trre1g02190 1256 MobiDBLite consensus disorder prediction 1169 1185 - -
Trre1g02190 1256 MobiDBLite consensus disorder prediction 782 805 - -
Trre1g02190 1256 MobiDBLite consensus disorder prediction 839 966 - -
Trre1g02190 1256 MobiDBLite consensus disorder prediction 695 716 - -
Trre1g02190 1256 MobiDBLite consensus disorder prediction 512 581 - -
Trre1g02190 1256 MobiDBLite consensus disorder prediction 906 966 - -
Trre1g02190 1256 MobiDBLite consensus disorder prediction 1203 1220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02190 Trre-Chr1 17443766 17450585 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02190 - - gmx:100776127 1707.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g02190 1 17443766 17450585 Trre1g02190 1 17443766 17450585 ECH
Trre13g03688 13 44503621 44510622 Trre1g02190 1 17443766 17450585 PCT