Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03688 ATGCCACCAACAATACCGAATAGGAATCACCAATTTACTAATGCTTCTTCTGTTAATCAATTTTGGTCTAACAATTCTACCGACGTTAGCTTCAATCAGCTTCAGAAGTTCTGGAGTGAATTGTCGCTAGAAGAACGGCAAGGACTTCTGAAGATTGACAAGCAATCTCTTTTTGAGCAAGCCCGTAAAAATATGTACTGCTCCAGGTGCAATGGATTGCTTCTTGAAGGGTTTTTGCAGATTGTTATGTATGCAAAATCTTTGCAGCAAGAAGGGTCGGGTGCTCAATTTCCTTGCAACAAACTTGGAGGTTTGAAAAAGCAAAAAAATGGTGGATCAAGTGCTATAAAAGGGCACCAAGATGAAATTCAAGATCCATCTGTCCATCCTTGGGGAGGTCTGACCATAACGCGCGAGGGCTCATTAACACTTATGAACTGCTACTTGTATTCAAAGTCTCTAAAAGGATTGCAAATTGTCTTTGATGGGGCACAGGCTAGGGAGCGGGAAAGAGAACTTCTTTATCCTGATGCCTGTGGTGGGGCAGGCCGTGGTTGGATTAGCCAAGGAATAGCGAGTTATGGCAGAGGGCATGGAATAAGAGAAACATGCGCCTTGCACACTGCCAGACTTTCATGTGATACACTGGTAGATTTTTGGTCAGCGCTCGGAGAGGAGACTCGATTTTCTCTTCTAAGGATGAAGGAAGATGATTTTATTGAGAGACTTATGTACAGGTTTGATAGCAAGAGGTTTTGCCGAGATTGTAGAAGAAATGTTATTCGAGAATTCAAGGAACTAAAGGAACTGAAACGCATCCGCAGAGAACCTCGTTGCAGCAGCTGGTTCTGTGTTGCTGACTCAGCCTTTCAGTATGAGGTAACTGATGACTCAATTCAAGCTGATTGGCGTCAGACATTTCCAGATGCTTTGGGAACCTACCATCACTTTGAGTGGGCTGTGGGTACAAATGAAGGAAAATCCGACATTTTGGAATTTAAAAGTGTTGGATTGAAGGGATGTGCCAAAGCCAGCAGCCTTGATCTTGGTGGTTTGAGTGCATGTTTCATCACTCTCCGAGCTTGGAGATTAGATGGACGCTGTACCGAACTTTGTGTTAAGGCTCACTCATTGAAAGGTCAGCAGTGTGTACATTGCAGATTAATCGTAGGAGATGGTTATGTCACAATTACTAAAGGAGAAAGTATCCGAAGATTCTTTGAGCATGCTGAAGAGGCTGAGGAGGAAGAGGATGATGATTCAGTTGACAAGGACGGAAACGAGCTTGATGGAGATTGCTCTCGTCCCCAAAAGCATGCAAAAAGCCCTGAACTGGCTCGAGAATTTCTGCTAGATGCTGCTACTGTTGAAAAAGCTTTCAGAGAAGGAACAGCACGCCAAAATGCACACAGCATATTTGTCTGTCTTGCATTAAAACTGCTGGAGGAACGAGTGCATGTTGCTTGCAAAGAAATCATTACATTAGAAAAGCAGATGAAACTTCTTGAAGAAGAAGAAAAAGAAAAACGTGAAGAAGAAGAACGCAAAGAGAGGAGAAGGGCAAAGGAAAGGGAGAAGAAACTTCGGAGGAAGGAAAGACTAAAAGGAAAGGAAAAAGATAAAGACAAAATATGTTCTGAATCAAATGATATACTTTGTTCTTCAGAAATCTCCAAAGAAGAATTGGCTGCAGGTGCTGATATGGATCAAAATAATCTTATTAGTTGCAGGAGTTCAGTTGTTGAAACAGATGAAGTCAATCTTCTGAGTGACGATTCTCCTAACATCCAAGATAAAGAATTCTCCAGTGAGAACGATACTTTGAGAGCACAACACCTCTCTGATGATGAATGTGATGAAGAAAATTCCAATACAAATGATGAGATAGGTCAGCAGTCAGCAGTTGAACAATCAATGGTTTCTCATCAAAGACTGGGAGGCAAGAAAGAATTTCAGCTGGATGATATGCCTATGAAGTGGTCTGACAGACGCCGATATGCCATTGTTTCTGACAATGTTGCAATGGTTGGCAAAACCGATTCAAGACATTATGGCGATAGTTTTTTGACATCATCTAGAGTAGTTAATGGATCGAATAGGCAATCAAGAACAAGTGTTCCTGCAAAATCCAATGGTCGAAATGTCAGTCCAAAGTATGGCGAGAAGTTTTACAGTTCAAAGAACCGGATAAATGACAGATGTGATATTCATTCTTGTAGCTGTAGTCCAAATAATGAATATAAGATAAGGGTTGAGCAACATTCTCCCATGACTAGAGTTAGTCGGGAATCAAAGCCTGTCAGTCAATCTGAACCTGCTAAGCAGTTTTATCGCGGTAGCAAGTATAATCAAGTAGACTACATGCATGAGTATAATGGAAGACCCAAAAGCAAAAACATTTTGGGGAACTATCCCAGCAGGGAATTGTTTCAAACCAAAAAGGTTTGGGAGCCTACAGAATCTCTGAAGAAATATCACCACAGCAATTCAGATTCTGATGTTATTTTGAGGTCCACAAAAGTTCAAGAAGCTCAGTCTGATCTGATCAAGTCATCTATTGGGGAAAGTGTTGATTCAGGTGAAAATGATCATGAGAACTGTAATTCAAAGAATTTAAGTAGAACGGATGCAGGCTGTGAAAATGATGTTCAAGTTAAAATTGAAGGTTCTTGTAGCTCTAAGGAAATTGCTTCTGTGGAACCTGAAATATGCCTAACTGGAGACTCTGCCTTGAACACTTCTGATCCTACTCAAAGTAGCACTTTTAGTTCTGACAATTGCTCATCATGTCCAAGTGAGGGTGACAATAATACAACCTCGTCAAACCGTGAAAATCAAGAATCCTTAACCACATCAGATTCTGAAGACGTTAGCCAACAATCTGAATATAGAGATATTTCAGCTTGTGTGGAAACTGTGCTGTCTGATTGTCATGAAGTTGCTATGGAGAATAACCAGAATGCAAATGGTAAGAGTTTGTCCAGAAGTTCAAGTTCACCGATTGGTCAATCCTTGGATGGAACAAGAAGTGATGCATCAGGGAATTTTGTGGAATTTGCCCAAAATTTTAATAATGGGTTTTCCACTGCTAGCATGTGTTCTCAACCTCAAAGCCTGCTTCCTCCAGTGTCAAATCAAAATATTCAATTTCCAACGTTTCAAGCTCCTTCAACAATGGGTTATTTCCATCAAAATCCAGTTTCATGGCCAGCAGCTCCAACAAATGGGTTGATGCCCTTCCCGCACCCAAATCATTACTTGTATGCTGGCCCTCTTGGATATGGCTTAAATGAGGACCCACACTTTTGCATGCAGTATGGTTCCTTGCAGCAACCAACACCCTTGTTCAACCCTGCTATTCCAGTTTATCAGCCAGTTGCCCAAGCTAATGTCTTAAATTCAGAGGAATGGACACGAGTTTCCAAGCCAGCTTCCTTGCAAGAGCATATTAATGGATCTTTTGCAGAAAGAGCTGTTTCATCTGGAAATAATTTGAAAAAACCAGTGTTCAGTGGAGAAGTTAAACATAATCGTTCTGCGAAGTCACAAGAGAATAACGGTGACTTTTCCTTGTTTCATTTTGGTGGGCCTGTAGCCCTCTCAGCAGGGTGTAAATCGGCTTTGGCATCTTCAAATGGCGATGCTGTTGGTGATTTTAGCTTGAAAAGTTCAGCGGATCATGCTGAAAAGGTCCATACTTGCAATAAAAAAGAGACCACCACCATTGAGGAATACAATTTGTTTGCTGCAAGTAATAACTTAAGGTTTTCAATTTTCTAA 3780 0.4108 MPPTIPNRNHQFTNASSVNQFWSNNSTDVSFNQLQKFWSELSLEERQGLLKIDKQSLFEQARKNMYCSRCNGLLLEGFLQIVMYAKSLQQEGSGAQFPCNKLGGLKKQKNGGSSAIKGHQDEIQDPSVHPWGGLTITREGSLTLMNCYLYSKSLKGLQIVFDGAQARERERELLYPDACGGAGRGWISQGIASYGRGHGIRETCALHTARLSCDTLVDFWSALGEETRFSLLRMKEDDFIERLMYRFDSKRFCRDCRRNVIREFKELKELKRIRREPRCSSWFCVADSAFQYEVTDDSIQADWRQTFPDALGTYHHFEWAVGTNEGKSDILEFKSVGLKGCAKASSLDLGGLSACFITLRAWRLDGRCTELCVKAHSLKGQQCVHCRLIVGDGYVTITKGESIRRFFEHAEEAEEEEDDDSVDKDGNELDGDCSRPQKHAKSPELAREFLLDAATVEKAFREGTARQNAHSIFVCLALKLLEERVHVACKEIITLEKQMKLLEEEEKEKREEEERKERRRAKEREKKLRRKERLKGKEKDKDKICSESNDILCSSEISKEELAAGADMDQNNLISCRSSVVETDEVNLLSDDSPNIQDKEFSSENDTLRAQHLSDDECDEENSNTNDEIGQQSAVEQSMVSHQRLGGKKEFQLDDMPMKWSDRRRYAIVSDNVAMVGKTDSRHYGDSFLTSSRVVNGSNRQSRTSVPAKSNGRNVSPKYGEKFYSSKNRINDRCDIHSCSCSPNNEYKIRVEQHSPMTRVSRESKPVSQSEPAKQFYRGSKYNQVDYMHEYNGRPKSKNILGNYPSRELFQTKKVWEPTESLKKYHHSNSDSDVILRSTKVQEAQSDLIKSSIGESVDSGENDHENCNSKNLSRTDAGCENDVQVKIEGSCSSKEIASVEPEICLTGDSALNTSDPTQSSTFSSDNCSSCPSEGDNNTTSSNRENQESLTTSDSEDVSQQSEYRDISACVETVLSDCHEVAMENNQNANGKSLSRSSSSPIGQSLDGTRSDASGNFVEFAQNFNNGFSTASMCSQPQSLLPPVSNQNIQFPTFQAPSTMGYFHQNPVSWPAAPTNGLMPFPHPNHYLYAGPLGYGLNEDPHFCMQYGSLQQPTPLFNPAIPVYQPVAQANVLNSEEWTRVSKPASLQEHINGSFAERAVSSGNNLKKPVFSGEVKHNRSAKSQENNGDFSLFHFGGPVALSAGCKSALASSNGDAVGDFSLKSSADHAEKVHTCNKKETTTIEEYNLFAASNNLRFSIF 1259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03688 1259 MobiDBLite consensus disorder prediction 427 441 - -
Trre13g03688 1259 MobiDBLite consensus disorder prediction 504 521 - -
Trre13g03688 1259 MobiDBLite consensus disorder prediction 412 426 - -
Trre13g03688 1259 MobiDBLite consensus disorder prediction 852 875 - -
Trre13g03688 1259 PANTHER OS10G0105400 PROTEIN 7 992 - -
Trre13g03688 1259 MobiDBLite consensus disorder prediction 504 533 - -
Trre13g03688 1259 MobiDBLite consensus disorder prediction 910 962 - -
Trre13g03688 1259 MobiDBLite consensus disorder prediction 590 609 - -
Trre13g03688 1259 MobiDBLite consensus disorder prediction 696 720 - -
Trre13g03688 1259 MobiDBLite consensus disorder prediction 410 441 - -
Trre13g03688 1259 Coils Coil 478 531 - -
Trre13g03688 1259 MobiDBLite consensus disorder prediction 986 1009 - -
Trre13g03688 1259 MobiDBLite consensus disorder prediction 614 636 - -
Trre13g03688 1259 MobiDBLite consensus disorder prediction 696 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03688 Trre-Chr13 44503621 44510622 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03688 - - gmx:100813046 1856.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03688 13 44503621 44510622 Trre13g03688 13 44503621 44510622 ECH
Trre13g03688 13 44503621 44510622 Trre1g02190 1 17443766 17450585 PCT