Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02100 ATGGGTTGGAACCTCTTCTTTTGGCTTCTCATTTGTTTCCCCACCAATATTGCTCTTCTCGCTTCAACTTTCTACCAGGTTTTGATTTTATATGACTTGGAAGCTGATTATATCAACCCATTTGATGCTTCATCTCGGATTAACTACTTCATTCTACCTGAGTTCATTGGACAAGGAGTGTTATGTGTTCTCTGTCTCCTCACTGGTCATTGGTTCATGTTTTTGCTCAATGTTCCTATTACTTGCTATCATGCCATGCTGTATGTGAAAAGAGAACATCTTATTGATGTTACTGAAGTGTTTAGAGTACTCAACGCCGAGAAGAAACTCCGGATAGCCAAAATTGCTTTGTACTTGATAGTCCTCGTTGTCACCATCTTCAGGCTTACATTGATCGGTGTCTACTATTTAGGCTTGGAAGATGACGATGACTTGCGATATTTTTGGTAA 450 0.3956 MGWNLFFWLLICFPTNIALLASTFYQVLILYDLEADYINPFDASSRINYFILPEFIGQGVLCVLCLLTGHWFMFLLNVPITCYHAMLYVKREHLIDVTEVFRVLNAEKKLRIAKIALYLIVLVVTIFRLTLIGVYYLGLEDDDDLRYFW 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02100 149 PANTHER CORNICHON-RELATED 5 132 - -
Trre1g02100 149 Pfam Cornichon protein 7 127 IPR003377 GO:0016192
Trre1g02100 149 SMART Cornichon_2 6 127 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02100 Trre-Chr1 16747316 16752541 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02100 K20368 - gmx:100500341 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g02100 1 16747316 16752541 Trre1g02100 1 16747316 16752541 ECH
Trre13g03528 13 43078008 43081920 Trre1g02100 1 16747316 16752541 PCT