Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03528 ATGGCTTTCGATTTGTTCTTTTGGCTTCTCATTTGTTTCCCTTTCAATATTGCTTTTTTGGCCTCAGCTTTCTACCAGGTTTTAATGTTGTCTGACTTAGAATCTGACTATGTTAACCCATATGATGCTTCATCAAAAATCAATTACTTTGTGGTTCCAGAGTTTATTGGTCAAGGATTATTGTGTGCTCTCTTTCTCTTCACTGGTCACTGGTTCATGTTTCTTTTGATGCTTCCTCTTGCTTGCTATCATGTGAGGCTGTATGTTAAGCGGCAGCATCTCCTTGATGTTACTGAAGTGTTTAGGGTACTCAATGCGGAGAAGAAATTTCGGATAGCTAAGCTTGCTTTTTACCTAACAATGATCATTATAAATATCTTCAGGCTTGTATTACTTGTCGTCTACTATTTCGATATGGATGATGAATGA 429 0.373 MAFDLFFWLLICFPFNIAFLASAFYQVLMLSDLESDYVNPYDASSKINYFVVPEFIGQGLLCALFLFTGHWFMFLLMLPLACYHVRLYVKRQHLLDVTEVFRVLNAEKKFRIAKLAFYLTMIIINIFRLVLLVVYYFDMDDE 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03528 142 Pfam Cornichon protein 7 127 IPR003377 GO:0016192
Trre13g03528 142 SMART Cornichon_2 6 127 IPR003377 GO:0016192
Trre13g03528 142 PANTHER CORNICHON-RELATED 4 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03528 Trre-Chr13 43078008 43081920 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03528 K20368 - gmx:100527262 231.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03528 13 43078008 43081920 Trre13g03528 13 43078008 43081920 ECH
Trre13g03528 13 43078008 43081920 Trre1g02100 1 16747316 16752541 PCT