Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02054 ATGTTGAATGATCAAATAGCTTCAACAAGCCATAGCAGAGAACATAATAATGATGATTATGATGAAGGAGACCAAGAAATAAGAGAAATTCATGCCTTAACCCCACCTCATCATCCTCATACAAGACAAACATTACACAGTCACCAATCATCTTTAGTTTCCATAGCTAATACAGAAGTTGCTTCAAGTGAGAATTTCACAAGTATAAGTAGAGAATTCAGTGCTTTGGTTTTAGCAGGTTCAAGTATTGATCATAACAACATAAGTCCAATGATGAGTAATGTTACCAATTACAGCAATGAAAGAGAAAGCAACAATAGTAGAAGCTTTAACAATTTCTTGAGGATTAGAGAAGATGAATTGATGGAAGAGACAAATCCTTTAGCAATTGTGGCTGATAATAACCCTTTGGAGATGCTTCCATCAACATCATCATCTTCAGGAACTATCAATGGTCATCATCAGAGTGAAGTGTCAGTTCAGAGGGTGAAGAAAGAAGAGGTTGAATCAAAGATAGCTGCATGGCAGAACAATAAGGTTGCTAAGGTTAATAATAGATTCAAAAGGGAAGATGCTGTCATCAATGGTTGGGAGAATGAGCAGGTTCAGAAAGCTAATTCATGGTTAAAGAAAGTTGAGAGGAAGCTGGAGGATAAAAAAGCAAAAGCATTGGAGAAAATGCAAAATGATGTAGCAAAAGCTCATAGGAAAGCACAAGAGAGAAGGGCATCTGCAGAGGCTAAAAGAGGTACTAAAATAGCAAGGGTTCTTGAGATTGCTAACCTTATGAGAGCTGTTGGAAGAGCTCCTTCCAAAAGATCCTTCTTTTAA 831 0.3706 MLNDQIASTSHSREHNNDDYDEGDQEIREIHALTPPHHPHTRQTLHSHQSSLVSIANTEVASSENFTSISREFSALVLAGSSIDHNNISPMMSNVTNYSNERESNNSRSFNNFLRIREDELMEETNPLAIVADNNPLEMLPSTSSSSGTINGHHQSEVSVQRVKKEEVESKIAAWQNNKVAKVNNRFKREDAVINGWENEQVQKANSWLKKVERKLEDKKAKALEKMQNDVAKAHRKAQERRASAEAKRGTKIARVLEIANLMRAVGRAPSKRSFF 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02054 276 PANTHER OS02G0116800 PROTEIN 80 272 - -
Trre1g02054 276 MobiDBLite consensus disorder prediction 142 162 - -
Trre1g02054 276 Coils Coil 202 229 - -
Trre1g02054 276 MobiDBLite consensus disorder prediction 1 22 - -
Trre1g02054 276 MobiDBLite consensus disorder prediction 142 157 - -
Trre1g02054 276 Pfam Remorin, C-terminal region 167 272 IPR005516 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02054 Trre-Chr1 16334840 16336502 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02054 - - adu:107492944 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03449 13 42227865 42230648 Trre1g02054 1 16334840 16336502 PCT