Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03449 ATGTTGAATAATAATAATAATCCAAATATTTCCACCAACCATGTTTCACATGAAAACCAAGAAGATGAACAAATAACTGAAATAAGAGAAATCCATGCCTTAACACCACCTAGACTTCCACCTCCTCAACCACCAACAAACCGCGGCGGCGGCAGCAGCCATAGCCACCGTTCATCTTCTCTATCAACTACAAGCACAGATAGTGAAAACTTCACAACTATAAGTAGAGAATTCAATGCTCTTGTTCTAGCAGGATCAACTATTGATCATCACAACAATGAACATGAAACAAGTAACAACAATAACTTGGGGAGGATTAGAGAAGATGATCATATGATGGAAGAAACAAACCCTTTGGCTATTGTGGTAGATAATAATCCTTTAGATCCTGTTCCATCTTCTGCTAGTAGAAGAAATATGGATGGTGGTAGAAGCAGTGAAGAACATGTGTCGGTTGATAGAGTGAAGAAAGAGGAAGTTGATGCAAAGATATCAGCTTGGCAGAATGCTAAAGTTGCTAAGATTAATAATAGGTTTAAGAGAGAAGATGCTGTTATTAATGGTTGGGAGAGTGAACAAGTTCAGAAAGCTACTTCTTGGATGAAGAAAGTTGAGAGAAAGTTGGAGGAGAAAAGAGCAAGAGCATTGGAAAAAACACAAAACAAGGTAGCAAAAGCTCATAGAAAAGCAGAGGAGAGGAAAGCATCAGCTGAGGCAAAAAGAGGAACTAAAGTTGCTAGAGTTCTTGAGATTGCTAACCTTATGAGAGCGGTTGGAAGACCACCTGCCAAAAAATCTTTCTTCTAA 807 0.3866 MLNNNNNPNISTNHVSHENQEDEQITEIREIHALTPPRLPPPQPPTNRGGGSSHSHRSSSLSTTSTDSENFTTISREFNALVLAGSTIDHHNNEHETSNNNNLGRIREDDHMMEETNPLAIVVDNNPLDPVPSSASRRNMDGGRSSEEHVSVDRVKKEEVDAKISAWQNAKVAKINNRFKREDAVINGWESEQVQKATSWMKKVERKLEEKRARALEKTQNKVAKAHRKAEERKASAEAKRGTKVARVLEIANLMRAVGRPPAKKSFF 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03449 268 PANTHER OS02G0116800 PROTEIN 40 264 - -
Trre13g03449 268 MobiDBLite consensus disorder prediction 124 154 - -
Trre13g03449 268 MobiDBLite consensus disorder prediction 1 15 - -
Trre13g03449 268 MobiDBLite consensus disorder prediction 48 70 - -
Trre13g03449 268 MobiDBLite consensus disorder prediction 1 70 - -
Trre13g03449 268 Coils Coil 201 236 - -
Trre13g03449 268 MobiDBLite consensus disorder prediction 216 239 - -
Trre13g03449 268 Pfam Remorin, C-terminal region 159 263 IPR005516 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03449 Trre-Chr13 42227865 42230648 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03449 - - psat:127126307 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03449 13 42227865 42230648 Trre13g03449 13 42227865 42230648 ECH
Trre13g03449 13 42227865 42230648 Trre1g02054 1 16334840 16336502 PCT