Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01609 ATGAATTCTTTTCAAGAATTTGAATCCTCATCAAACAACAAAGACATGATGAACATAAACCCTAAAATGAGCATAACAAACAAATCATCATCATCATCATCCATGATGGCCATATCATCAACATCTTCAACATCAGCTTCATCATCATCAACAACAACAACAACATCACCACCATCAATATCCACAATAACAACAACACCATCAAGTAGATATGAGAATCAAAAAAGAAGAGATTGGAACACATTTGGACAATACCTAAGAAACCATAGACCACCACTATCACTTCCACGTTGTAGTGGAGCTCATGTCCTTGAATTCTTGCGATATCTCGATCAATTCGGTAAAACAAAAGTTCATACACAGATTTGTCCCTTTTATGGTCACCCAAATCCACCTGCACCTTGTCCTTGTCCTCTTCGCCAAGCATGGGGAAGCCTTGATGCACTCATAGGAAGACTTAGAGCTGCTTTTGAAGAGAATGGTGGGAAACCGGAATCTAATCCTTTTGGCGCTCGCGCTGTTCGACTTTACCTTCGCGAAGTTAGAGATTCACAAGCTAAAGCTAGAGGTATTAGTTATGAGAAAAAGAAGCGTAAGCGTCCGCCTCAGCCACCGCTACCACCACCACCATCAAATGCAAGTACAAGTGATCTATGA 657 0.4079 MNSFQEFESSSNNKDMMNINPKMSITNKSSSSSSMMAISSTSSTSASSSSTTTTTSPPSISTITTTPSSRYENQKRRDWNTFGQYLRNHRPPLSLPRCSGAHVLEFLRYLDQFGKTKVHTQICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPESNPFGARAVRLYLREVRDSQAKARGISYEKKKRKRPPQPPLPPPPSNASTSDL 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01609 218 PANTHER PROTEIN G1-LIKE2 35 202 IPR040222 -
Trre1g01609 218 MobiDBLite consensus disorder prediction 1 70 - -
Trre1g01609 218 MobiDBLite consensus disorder prediction 184 201 - -
Trre1g01609 218 Pfam ALOG domain 65 183 IPR006936 -
Trre1g01609 218 MobiDBLite consensus disorder prediction 1 76 - -
Trre1g01609 218 ProSiteProfiles ALOG domain profile. 70 197 IPR006936 -
Trre1g01609 218 MobiDBLite consensus disorder prediction 184 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01609 Trre-Chr1 12295910 12296566 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01609 - - zju:107422848 265.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03980 13 47952747 47953752 Trre1g01609 1 12295910 12296566 PCT