Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01079 ATGGTAGCATGTATCGACATGGCATTCTCCGTAATTCTTTCACCTTCTTCTTATCCATCTTTCTTCTCCAAGCCCGCTTCATTCTTAAGCAGCAATACTAGATTACTGGGCTTGGGCCCGGGCCTGGGCTTGAGCTTTGAGTTTCAGAAAAATGGAAGAAGGATATTAAGGAGACAGCTCAAGTTTGTTATCTCCGCACAACTTTCTAAATCATTTTCATTCACCTTCGGACTCGACTCTCCGAACTTGAATTTCTTCCAATCCCATGATCTATCAAAGTTGTCCTGGAGGGGACCAGTTCCCGGTGATATTGCCGAAGTCGAGGCATATTGTAGGATCTTTAGGAACTCTGAAAGGCTTCATTCCGCATTAATGGATGCATTATGCAACCCGTTGACCGGGGAATGTACTGTCTCATATGAGGTTCCATCAGATGAGAAACCTCAACTCGAGGATAAAATAGTTTCAGTCCTCGGATGCATGGTATCCCTTGTGAACAAAGCTAGGGATGATGTTCTTACCGGAAGGTCCTCAATTATGAATCCCTTTCACGATGCTGACGTTAGCGCAACAGACGATAAGCTCCCTCCACTTGCCGTTTTCAGGAGCGAGATGAAAAGGTGTTCTGAGAGTTTACATGTTGCCCTTGAGAATTATTTAATACCTAATGATGATCGAAGCTTAAACGTATGGAGGAAACTTCAGAGGTTGAAGAATGTCTGCTATGATTCTGGTTTTCCACGTCGTGACGGTTATCCTTGTTACTCACTATTTGCTAATTGGAGTCCTGTATATTTTTCTACTTCTAAAGACGAAAATGAATCCGAAGACTTGGAAACAGCTTTTTGGACTGGCGGTCAGGTGACAGAAGAAGGACTAACGTGGTTACTCGATAAAGGATATAAAACGATTATAGATATCAGAGCCGAGACTGTAAGAGATAATTTTTATGAAGTGGCTGTGAATGATGCAATTTCATCTGGGAAAATTGAGTTAGTAAAAATCCCAGTTGAAGTTATGACTGCACCGACAATGGAACAGGTTGTAAGGGTTGCGTCTTATGTATTGGATAGCAGCAAAAGGCCTATCTATCTTCATAGCAAAGAAGGAGTTTGGAGATCAATTGCCATGGTCTCCCGATGGAGGCAGTACATGACTCGCTCTTTGTCGCAGAATGTTTCTAGTCCAACAATTGTTCCCTCTAACATGTTATCACATTCTACAAATAGCCCCGCAAAACTGCAGGATTCTTCCGTGACTGCGGCAAGATCCTCTCTTGAAAACGATATCACTTCACTGCAAGACAGTTTCGACGCAACAAATAGTTCTGTTGGAACATCTGACAGAATTATCTCCGAAAAGAAGTATGATGAAAAAACACAAGGTAATGCCGCCTTAAATGGAATTTCTCTTGATAAGGAAGGATCGTTTCCGAGTTTTTCTAGCAAGATTAACCCTTTAAAAGCTCAAATTCCCCCTAGTGATATATTTTCTAAAAAAAAGATGTCCAAATTTTTGGGTAGCAGGAAGATCTCACCTCCTGATTATATCGATTATCAAATCAAAAGGGCGAAAAGCTTACCGCAATATAAGAACACACCTATTGGAAGATTTCAGGCAGATGTGATTGTTTCCAATGGTACTAAACCTGTGCCTAAAATTGTAAGTCCTGATAGCTTAAATGGATCCGCTCATGTTGATTATCCATCTGGAGATCCCGAAGTTATTGTCAGCGGCAATGGGAAGTTAGTGAATGGGAATACTTCTAGTTCTGGTAGGACAACAGTAAACGGATTTAGTCAAGGGGAATTACAACATACGGCTAATGCCAATGCTTCTGGCGTTGTGAATAATGATAGCGTGACAAATAAATCTCCAAGGGTTGAAGATGGTACAGTTAAGGCTGGCTTAACTTTACACGACGAAGAGTTGAGATCCATTGAAGGCGATATGTGTGCGTCGTCAACGGGAGTTGTAAGGGTGCAGTCAAGAAAGAAAGCGGAGATGTTCTTGGTTCGAACAGATGGATTTTCTTGTACAAGAGAAAAGGTCACTGAATCTTCTTTGGCTTTCACTCATCCTAGCACTCAGCAACAGATGCTTATGTGGAAGTCTACACCAAAGAATGTGCTGTTGTTAAAAAAGCTGGGAGATGAACTATTGGAAGAAGCAAAAATGGTTGCTACTTTTCTTCATAACCAAGAGAAAATGAATGTTATTGTGGAACCTGATGTGCACGATGTATTTGCTAGAATTCCCGGTTTTGGATTTGTGCAGACCTTCTATAGCCATGATACAAGTGATCTACACGAGAAAGTAGATTTTGTGGCATGCTTGGGGGGAGATGGTGTTATACTGCATGCATCAAATCTATTCAGAGATGCAGTTCCGCCGATTGTATCATTTAACCTTGGTTCCCTTGGTTTTTTGACTTCTCATAGCTTTGAAGAGTATAAGCAAGACTTAAGACAAGTCATTCACGGAAATACTTCACGAGATGGTGTCTACATTACTCTTAGGATGCGTCTCCGATGTGAAATTTTTCGTAAAGGTAAAGCAATGCCAGGGAAAGTATTTGATATTCTCAATGAGGTGGTTGTTGATCGGGGTTCTAATCCATACCTTTCAAAGATTGAATGCTATGAACATGATCGACTTATAACCAAAGTACAAGGTGATGGAGTCATCGTTGCCACCCCTACAGGAAGTACAGCCTATTCTACAGCTGCAGGAGGTTCCATGGTCCATCCAAATGTTCCCTGCATACTGTTTACCCCGATATGTCCGCATTCACTGTCATTTAGACCAGTCATACTTCCAGATTCTGCTCGATTAGAGTTAAAGATTCCAGAAGATGCTAGAAGTAACGCGTGGGTTTCGTTTGATGGAAAGAGAAGACAGCAGCTCTCAAGAGGAGACTCAGTTCGAATACATATGAGTGAACATCCGCTTCCAACTGTTAACAAGTTTGACCAAACAGGCGATTGGTTCTGTAGCTTGATTCGTTGCCTAAATTGGAACGAGAGGCTTGATCAAAAGGCTCTATAA 3048 0.4154 MVACIDMAFSVILSPSSYPSFFSKPASFLSSNTRLLGLGPGLGLSFEFQKNGRRILRRQLKFVISAQLSKSFSFTFGLDSPNLNFFQSHDLSKLSWRGPVPGDIAEVEAYCRIFRNSERLHSALMDALCNPLTGECTVSYEVPSDEKPQLEDKIVSVLGCMVSLVNKARDDVLTGRSSIMNPFHDADVSATDDKLPPLAVFRSEMKRCSESLHVALENYLIPNDDRSLNVWRKLQRLKNVCYDSGFPRRDGYPCYSLFANWSPVYFSTSKDENESEDLETAFWTGGQVTEEGLTWLLDKGYKTIIDIRAETVRDNFYEVAVNDAISSGKIELVKIPVEVMTAPTMEQVVRVASYVLDSSKRPIYLHSKEGVWRSIAMVSRWRQYMTRSLSQNVSSPTIVPSNMLSHSTNSPAKLQDSSVTAARSSLENDITSLQDSFDATNSSVGTSDRIISEKKYDEKTQGNAALNGISLDKEGSFPSFSSKINPLKAQIPPSDIFSKKKMSKFLGSRKISPPDYIDYQIKRAKSLPQYKNTPIGRFQADVIVSNGTKPVPKIVSPDSLNGSAHVDYPSGDPEVIVSGNGKLVNGNTSSSGRTTVNGFSQGELQHTANANASGVVNNDSVTNKSPRVEDGTVKAGLTLHDEELRSIEGDMCASSTGVVRVQSRKKAEMFLVRTDGFSCTREKVTESSLAFTHPSTQQQMLMWKSTPKNVLLLKKLGDELLEEAKMVATFLHNQEKMNVIVEPDVHDVFARIPGFGFVQTFYSHDTSDLHEKVDFVACLGGDGVILHASNLFRDAVPPIVSFNLGSLGFLTSHSFEEYKQDLRQVIHGNTSRDGVYITLRMRLRCEIFRKGKAMPGKVFDILNEVVVDRGSNPYLSKIECYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCILFTPICPHSLSFRPVILPDSARLELKIPEDARSNAWVSFDGKRRQQLSRGDSVRIHMSEHPLPTVNKFDQTGDWFCSLIRCLNWNERLDQKAL 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01079 1015 Hamap NAD kinase [nadK]. 708 1006 IPR002504 GO:0003951|GO:0006741
Trre1g01079 1015 Pfam ATP-NAD kinase C-terminal domain 862 988 - -
Trre1g01079 1015 Gene3D Protein tyrosine phosphatase superfamily 271 404 IPR029021 -
Trre1g01079 1015 Pfam ATP-NAD kinase N-terminal domain 747 829 IPR002504 GO:0003951|GO:0006741
Trre1g01079 1015 PANTHER NAD KINASE 290 1015 - -
Trre1g01079 1015 FunFam NAD kinase 2, chloroplastic 697 861 - -
Trre1g01079 1015 Gene3D - 697 1007 IPR017438 -
Trre1g01079 1015 FunFam NAD kinase 2, chloroplastic 842 982 - -
Trre1g01079 1015 Gene3D - 842 982 IPR017437 GO:0003951|GO:0019674
Trre1g01079 1015 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 711 1010 IPR016064 -
Trre1g01079 1015 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 281 386 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01079 Trre-Chr1 8125038 8131493 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g01079 K00858 - gmx:100820030 1553.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g01079 1 8125038 8131493 Trre1g01079 1 8125038 8131493 ECH
Trre1g01079 1 8125038 8131493 Trre5g03581 5 34018077 34023431 PCT