Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00744 ATGCTGAAGCAAATTTTCAATAAGCTTCCCAAGAAGTCGTCGAAAACCGATTCGGACGAGCTGACACGTTCCAACGAATCCCCACGTGCCGCCGGTAAAAGCCAACACCGACCGAACAGTGGTGGTGCTTCCTTGAAACGAGCTTCGTCGTCTGCGGTGTTTCCGGCTAGCATGGTTTCTGGGATTGAACCTTTGGTGCCTTTTAAGGATGTTCCAAATGCTGAAAAGATGAACTTGTTTGTGAGTAAATTGAGTCTTTGTTGTGTTACATTTGATTTCACTGACCCTAGTAAGAACATTGCTGATAAAGATGTTAAAAGGAAAACTTTGGTTGAACTTGTTGATTTTGTGGCTTGTGCATCAATGAAGTTTAGTGAGCCTGCTATTCTTGCAATGTGTAGAATGTGTGCTATTAATTTGTTTAGAGTTTTTCCACCTAATTATAGGGCTAATGGTGTTGTTGCTAGTGGTGGTGAGAATGATGATGATGATCCAATGTTTGATCCTGCTTGGCCACATTTGCAACTTGTTTATGAATTGCTGCTTAAATTTATCTCATCTTCGTGCCTCGATGCTAAGGTAGCCAAAAAGTATATCGATCATTCGTTCATTTCGAAATTGCTTGAATTGTTTGATTCTGAGGATCCTAGAGAAAGAGACTGTTTGAAGACAATTCTGCATAGGGTTTATGGAAAGTTCATGGTGCATAGACCCTTTATTCGGAAATCAATTAACAATATATTCTATCGGTTCGTGATCGAGACTGAGAAACATAATGGTATTGCCGAGTTGTTGGAAATTTTCGGGAGTGTGATTAGTGGATTTGCTTTACCTTTGAAAGAGGAACACAAAATCTTCTTGTGGAGAGTTTTGATTCCCTTGCACAAGCCTAAATCTTTAGGGGTCTACTTCCAGCAACTGTCCTTCTGTATTACGCAGTTTTTAGACAAGGAGCCGAAGTTAGCAAGCATTGTGATAAGTGGTTTGTTAAAATATTGGCCAGTAACAAATAGTCAGAAAGAGGTGATGTTTCTAGGGGAATTGGAAGAAATTTTAGAAGGAATTAGCATGGTGGAGTTCCAAAGGATCATGGTTCCACTGTTTTTGCGGATTGGGTGCTGTATTAACAGCCTACACTTTCAGGTAGCTGAAAGGACCCTTTTCTTATGGAACAATGACCACATTGTAAATTTGATTGCTCATAACCGGCATGTGATCCTGCCCCTCATATTTCCAGCACTAGAGAGGAATATCAAAAGCCACTGGAACCCAGCTGTTGTAAACTTAACTCATAATATCAGAAAGATGTTCGCGGAGATGGATGAGAAGTTTTTCGTATCTTGTCATACTCACTATAAGGAGGACGAAGCAATTTTAATACTGGAAGCCGAGAAGCGAAAGGAGGCATGGAAACAACTCGAGCAAATAGCCAGTCTCAAGCCTGTAATCGGAAATACTGCTGTTTTAGTCTCTCCTTTGATGACATGA 1488 0.4052 MLKQIFNKLPKKSSKTDSDELTRSNESPRAAGKSQHRPNSGGASLKRASSSAVFPASMVSGIEPLVPFKDVPNAEKMNLFVSKLSLCCVTFDFTDPSKNIADKDVKRKTLVELVDFVACASMKFSEPAILAMCRMCAINLFRVFPPNYRANGVVASGGENDDDDPMFDPAWPHLQLVYELLLKFISSSCLDAKVAKKYIDHSFISKLLELFDSEDPRERDCLKTILHRVYGKFMVHRPFIRKSINNIFYRFVIETEKHNGIAELLEIFGSVISGFALPLKEEHKIFLWRVLIPLHKPKSLGVYFQQLSFCITQFLDKEPKLASIVISGLLKYWPVTNSQKEVMFLGELEEILEGISMVEFQRIMVPLFLRIGCCINSLHFQVAERTLFLWNNDHIVNLIAHNRHVILPLIFPALERNIKSHWNPAVVNLTHNIRKMFAEMDEKFFVSCHTHYKEDEAILILEAEKRKEAWKQLEQIASLKPVIGNTAVLVSPLMT 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00744 495 Gene3D - 72 476 IPR011989 -
Trre1g00744 495 MobiDBLite consensus disorder prediction 27 46 - -
Trre1g00744 495 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 72 476 - -
Trre1g00744 495 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 479 IPR002554 GO:0000159|GO:0007165|GO:0019888
Trre1g00744 495 MobiDBLite consensus disorder prediction 10 26 - -
Trre1g00744 495 MobiDBLite consensus disorder prediction 1 46 - -
Trre1g00744 495 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 67 477 IPR002554 GO:0000159|GO:0007165|GO:0019888
Trre1g00744 495 SUPERFAMILY ARM repeat 78 473 IPR016024 -
Trre1g00744 495 PIRSF PP2A_B56 4 491 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00744 Trre-Chr1 5626587 5628343 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00744 K11584 - gmx:100781390 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00744 1 5626587 5628343 Trre5g02517 5 19591353 19596420 PCT