Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00697 ATGGATCCGATTAATCCTTTGCCTGCTGATGGACTTGATGTGGTCCATCAGAACGGCGTTTGTGTTGAACCTTCTAATTCTGGAGAGGACGGTGTTGTTTCAAATGATTTAGACCCTCGTGTTACTGAAGCTACGGAAACTATAGGTCTGAATGGAAATCTTGAAAGTTCTAACCAGTTAGAAAGTTCTGCAACTGAAAAGCTGCCTGTGGGGGAAATCGAAGGATCAAATGACAACGTGGACGGCAATAATATAACCAGTCCTAAGGTAAAGGAAGTGAAAATAACAATTCAAAAGGAACAATCAAGAGCACAAAAGGGTCCTTTAAAGAGTAATAATGCAAAGGTTGCTAGTTCCAGTGGCGTTCATGCAACTTTGGTGAAAAACAGCAAAATTGGAAAAGACAAACAGACATCATCTGCTGTTTCAAATGGCACCTCTGATTTAGACTCTCGTCCAAGACAGCAGCCTCTTAAAACCAAATCCTTCAATGATCGGCAGTCTCAATTGTCAAAGTTTGTTGGTTTGGTATTTTCTGATAGCTTTTTTTCACTTTGTTTTCCTCGGAATCCTTCAAAGTCTACTGCAGCATCTTCTGAAGTTGCAGAGGAGAAGAAAAAGCCAATATCATCAAAAAAGGGACCCCTTGTTAAAGTTCAAGGAGAAGCAGGATCTTCTCTTAAAAATGCAGAAGATGCCAAACCTCGTAGGGTGGGGACACTTCCAAACTATGGATTCAGTTTCAGGTGCGGTGAACGAGCTGAGAAAAGGAGAGAGTTTCTCACCAAGGTTGAGGAAAAGATTCAGGCAAAGGAGGAGGAGAAGAGTAGCTTGCAAGCAAAATCCAAGGAAAGCCAAGAAGCTGAGATTAAAAAGCTTAGGAAGAGCCTAACTTTTAAAGCAACTCCATTGCCAACTTTCTATCAGGAGCCTGCTCCTCCTAAAGTGGAACTGAAGAAGATACCAACTACACGAGCAAAATCTCCCAAGCTCGGTCGGAAGAAGAATTCAGCAAATTCTGAGTCTGATGGAAACGGAAGCACCAGTTCTCGACAAGGTCGTTTAAGTCTGAATGAGAAAGTGTTACAAAGCAACTCCACTAAAGGAGTTACCGTTGCCCATCCAAAGAAGCCGCTACGCAAGTCCCTTCCTACTCGACTCACTTCTGAAAAGACCAATTCAGCAGCTGCACCAAAGAAAGATAGTGCAACAAAGAAAGCTACTACTTTATCCAATGCTACAGGGGAAGAGAAAACCGAGATCACCGAAGCCAATGAAGAAAACAGTACCTTGTCGAGTGAGACAAATGTTGCTCTACCTCTGAATGTGGTTCCTTCAGATAAGCCAAGTGAAGCAGAATCTCATGTGAATGGTGACATATTGGTTGAAGAGAATCCTCAGCTTGTGTTGTCCCAAGAACCGATCACAACCGTGCATTGA 1440 0.4264 MDPINPLPADGLDVVHQNGVCVEPSNSGEDGVVSNDLDPRVTEATETIGLNGNLESSNQLESSATEKLPVGEIEGSNDNVDGNNITSPKVKEVKITIQKEQSRAQKGPLKSNNAKVASSSGVHATLVKNSKIGKDKQTSSAVSNGTSDLDSRPRQQPLKTKSFNDRQSQLSKFVGLVFSDSFFSLCFPRNPSKSTAASSEVAEEKKKPISSKKGPLVKVQGEAGSSLKNAEDAKPRRVGTLPNYGFSFRCGERAEKRREFLTKVEEKIQAKEEEKSSLQAKSKESQEAEIKKLRKSLTFKATPLPTFYQEPAPPKVELKKIPTTRAKSPKLGRKKNSANSESDGNGSTSSRQGRLSLNEKVLQSNSTKGVTVAHPKKPLRKSLPTRLTSEKTNSAAAPKKDSATKKATTLSNATGEEKTEITEANEENSTLSSETNVALPLNVVPSDKPSEAESHVNGDILVEENPQLVLSQEPITTVH 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00697 479 MobiDBLite consensus disorder prediction 267 296 - -
Trre1g00697 479 MobiDBLite consensus disorder prediction 425 440 - -
Trre1g00697 479 MobiDBLite consensus disorder prediction 46 166 - -
Trre1g00697 479 MobiDBLite consensus disorder prediction 77 91 - -
Trre1g00697 479 Pfam Targeting protein for Xklp2 (TPX2) domain 246 317 IPR027329 -
Trre1g00697 479 MobiDBLite consensus disorder prediction 267 479 - -
Trre1g00697 479 MobiDBLite consensus disorder prediction 46 65 - -
Trre1g00697 479 MobiDBLite consensus disorder prediction 186 238 - -
Trre1g00697 479 PANTHER PROTEIN WVD2-LIKE 4 99 461 IPR044833 GO:0008017
Trre1g00697 479 MobiDBLite consensus disorder prediction 100 166 - -
Trre1g00697 479 MobiDBLite consensus disorder prediction 333 371 - -
Trre1g00697 479 MobiDBLite consensus disorder prediction 385 418 - -
Trre1g00697 479 Coils Coil 261 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00697 Trre-Chr1 5266921 5270792 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00697 - - gmx:100786958 581.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00697 1 5266921 5270792 Trre1g00697 1 5266921 5270792 ECH
Trre1g00697 1 5266921 5270792 Trre5g05196 5 53114420 53117842 PCT