Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05145 ATGATGTCAATAATCGAGCATGTTGTGTTGTTCAAGATCAAAGAAGACGCTACACAATCAGATATTGATTCCATGGTAGATCGAGTTAATTCCCTCATATCCCTCAAAGAGATACTTCACCTCAATATGGTAAGTATTCAATCCTCTTCTTCCAATTTCACTCACATACTCCATACTCGATTCAGTTCCAAGGAAGATCTTCATGCATATGCCGTTCACCCTACCCATCTTGAAGTCATCAAAGTCAACGCTCCTTTAGTTTCTGATACCATGGCTCTTGATTGGGTCACCGAGATTCACGGTAACGACTTGGTTTTACCATATGGATCTGCTTTGAGAATTGTGTTTTTTAAGTTGAAGGAGGGTTTGGGTGAACATGTTAAAGATGAGGTGTTGAAGGGTATAAGTGGAATTCGACGTCAAAATGCTGTGCAATTTACTTTTGGGGAAAATTTCTCTCCTGGTAGAGCTAAAGGATTTTCCATTGCTACCCTTTCGGTTTTTACCGGTTTAAGTGAATTGAAAGAAGTTGATTTTGATGAGGAATTTCGGAAATATGACAAGATTAAGGAGAATCTAGACACTACACTGGTTCTTGATTTTGTGGCAAATGGCCAAACTGAGTCTTAA 630 0.3889 MMSIIEHVVLFKIKEDATQSDIDSMVDRVNSLISLKEILHLNMVSIQSSSSNFTHILHTRFSSKEDLHAYAVHPTHLEVIKVNAPLVSDTMALDWVTEIHGNDLVLPYGSALRIVFFKLKEGLGEHVKDEVLKGISGIRRQNAVQFTFGENFSPGRAKGFSIATLSVFTGLSELKEVDFDEEFRKYDKIKENLDTTLVLDFVANGQTES 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05145 209 ProSiteProfiles Stress-response A/B barrel domain profile. 5 95 IPR013097 -
Trre15g05145 209 Pfam Stress responsive A/B Barrel Domain 5 96 IPR013097 -
Trre15g05145 209 Pfam Stress responsive A/B Barrel Domain 113 202 IPR013097 -
Trre15g05145 209 ProSiteProfiles Stress-response A/B barrel domain profile. 111 201 IPR013097 -
Trre15g05145 209 SMART Dabb_2 111 203 IPR013097 -
Trre15g05145 209 SMART Dabb_2 5 97 IPR013097 -
Trre15g05145 209 Gene3D - 109 204 - -
Trre15g05145 209 Gene3D - 3 96 - -
Trre15g05145 209 SUPERFAMILY Dimeric alpha+beta barrel 111 203 IPR011008 -
Trre15g05145 209 SUPERFAMILY Dimeric alpha+beta barrel 2 98 IPR011008 -
Trre15g05145 209 PANTHER - 2 202 IPR044662 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05145 Trre-Chr15 61096380 61097009 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05145 - - mtr:25494186 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g05145 15 61096380 61097009 Trre15g05145 15 61096380 61097009 ECH
Trre15g05145 15 61096380 61097009 Trre3g02488 3 24246243 24247034 PCT