Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04199 ATGGCAGGAGACAGGGCAAAGAAATTGAAAGTCACCGAAAATCCCGAAGAGGTCGATGCAGAACTCATCCTCTCCATCGAGAAATTGCAAGAGATCCAAGACGACCTCGAAAAGATCAATGATGAAGCAAGTGATAAGGTTCTGGAAATTGAGCAGAAATACAATGAGATAAGGAAGCCGGTTTACGATAAGCGAAATGAGATTATCAAATCTATTCCTGATTTTTGGTTGAATGCTTTTTTGAGTCATCCTGCCCTCAGTGAACTTTTGAACGAGGAAGATCAAAAGATATTCAAGTATTTGAGTTCTCTTGAGGTTGAAGACAATAAAGATGTCAAATCTGGATACACAATCACCCTTAATTTCAATCCCAATCCCTTTTTTGAGAATTCAAAACTTTCAAAGACTTTTACTTTCCTTGAAGAAGGAACAACAAAGATCACTGCTACCCCCATAACTTGGAAAGAGGGCAAGGGAATACCCAATGGCGTCAATCATGAGAAGAACGGGAACAAACGGGCTCCTTGTGATGACAGTTTCCTTAGTTGGTTTTCTGATTCTGAATGTGAGCAGAAAGAGGATATGGTTGACATTCATGATGAGGTTGCAGAATTAATCAAGGATGATTTATGGTCAAATCCGCTCATTTATTTTAACAATGAGGAGCCTGATGAAGAGGATGCTGACGATGAAGCTGATGATGAGGTAATTGAAGTTCCACTTTTCTTGGAAAAAATAGAGGAAAAAGATGAGGACGACTCTGAAGATGAGGATGGCGATGAGGGTGCCGACGAGGAAGGCAATTGA 807 0.4027 MAGDRAKKLKVTENPEEVDAELILSIEKLQEIQDDLEKINDEASDKVLEIEQKYNEIRKPVYDKRNEIIKSIPDFWLNAFLSHPALSELLNEEDQKIFKYLSSLEVEDNKDVKSGYTITLNFNPNPFFENSKLSKTFTFLEEGTTKITATPITWKEGKGIPNGVNHEKNGNKRAPCDDSFLSWFSDSECEQKEDMVDIHDEVAELIKDDLWSNPLIYFNNEEPDEEDADDEADDEVIEVPLFLEKIEEKDEDDSEDEDGDEGADEEGN 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04199 268 MobiDBLite consensus disorder prediction 220 268 - -
Trre15g04199 268 Gene3D - 2 72 - -
Trre15g04199 268 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 13 234 IPR002164 GO:0005634|GO:0006334
Trre15g04199 268 Gene3D Nucleosome assembly protein 73 222 - -
Trre15g04199 268 MobiDBLite consensus disorder prediction 248 268 - -
Trre15g04199 268 SUPERFAMILY NAP-like 13 219 IPR037231 -
Trre15g04199 268 Pfam Nucleosome assembly protein (NAP) 70 220 IPR002164 GO:0005634|GO:0006334
Trre15g04199 268 MobiDBLite consensus disorder prediction 220 237 - -
Trre15g04199 268 Coils Coil 22 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04199 Trre-Chr15 52626114 52631883 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04199 K11290 - gmx:100810307 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04199 15 52626114 52631883 Trre5g01679 5 12134993 12138391 ECH
Trre15g04199 15 52626114 52631883 Trre15g04199 15 52626114 52631883 ECH
Trre5g01679 5 12134993 12138391 Trre15g04199 15 52626114 52631883 PCT