Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02915 ATGATGAAAAATCCTAAGTGTGAAGAGGAAAGGAGGCTTGAAGAGGAGCTCTTGATACCAATCCTGATGGGAGAGCATGTGATAAAATTGGCTGAGGAAGCAAAATCATCGAAGGTAGAATGTCGAGAACTGGCTAAGAAGGTGAAGGTACTTTGCAACAGTCTCCGAGGTGTTGTCCGAGTGGTTTCAGAGAACCACCAATCGGTGAATGAGAGACCAATCCGTCGCATGGTGAAGGAACTAGCGAAGAATTTGGAAAAAACGCTTGCACTTGTGCGAAAATGTAAGAATCAAGGAAGTGTCGGTGTACTGAAACATGTGTTAACGATAAGGAGTACCGGTGATTTTCGAAAAGTTTGGAACCTTCTTGAATCTTCGAACGGCGATATGATGTGGTTGCTGAGCATTTTTGAGTCTAGAGGGACTAATATTTCGCTCTCTCCTATTACTAGTAATGATCCAATTTTGGCGTGGGTATGGACTTATATTTATAACCTTCAGCTTGGTAATCCTAACGATCGTGCTGAAGCCGCAACGGAACTAGGTTCCCTCGCTCAAATTACTGACCGGAACAGGTTCATCATCATGGAGGAAGGTGGCGTTTTGCCTCTGCTCAAGGTTCTTAAAGATTCTGCTTTCCCTGATTGTCAAGTTGCAGCTGCCAATGCTCTTGCTAATGTTGTTTCCGATGATCAACAAAAGATCGTTGGATTCCTTCTCAACAACCTCGCTGTTCCTGTTATAGTTCAGGTTCTATCGGATGCAGTTTTCAGAGTTCGTGTTTCTGTTGCTAATTTGGTCTCTGCTATGGCTGATCAAGAGCCTCTTGCTCGCGAGGAGTTTATTAGGGCTAATGTGACAAAACCACTTGTGTCAATGTTGTCTATTGATAATGTTCTTGCTGAACCTGTCGTTGCTCGAAACAGCATTCATTCGGTGGTTCAAAATTTATCCGAGGCTGATTCTGATGGAAGCAGTAGCAGAGGAAGAGAGGCTGATCAGAGCCCTGAATTGAGGAATGCTGTTAAAGTTAGTTGCGCTAAGGCTCTTTGGAAACTCTCCAAAGGGTGTCTTTTGGCTTGCAAGAAGATTACCGAGACTAAAGGTTTGCTTTGTCTGGCTACGATTATTGGGTCTGAGAGTGGAGAATTGAGACTCAATTGTCTCATGGCTGTTATGGAAATTGCGGCCATGGCAGAATCCAACGTTGAATTTAGAAGAGGCGCTTTAAAGTCCACTGCACCCGCTGCAAAGGCGGTCTTGAATCAACTTTTAAGAGTGGTTCGACAAGAGAATGATTCTTTGTTACTGATTCCTGCCATCAAGTCAATTGGCTCCTTGGCTAGAAACTTTCCTGGAAAGGTTCCTCATGTTCTTGGTCCTTTAGTTACACACCTTGGAAACAAGGATTTGAATGTAGCAAGTGAAGTTATCGTTGCCTTGGTAAAGTTTGTGTGCGTCGAAAATTACAACCGTGTTGACCATTCTATGGTAATACTCGACCTTGATGGAATTCCTAAGCTAATGATTCTATTGAAGAAAAATGGTCGTCAACAAGTGTACGGCCTAAAATTACTTTGTTATTTCGCGTTAAATGTTGGCAATAGTAAGGTTCTTGAGCAAGAACGCGTATTGAGTACTTTAGACAAGCTCGGTCATCTTGTTCTAGCTCAAAATCCTGATTTGAAGGAACTGTTCGCAAACGCTATTCACCACCTCACTCTTTATCAGCCAGGAGTTCAATTCCACAGACAGCCCTTGGGATATGGACTATAA 1776 0.4302 MMKNPKCEEERRLEEELLIPILMGEHVIKLAEEAKSSKVECRELAKKVKVLCNSLRGVVRVVSENHQSVNERPIRRMVKELAKNLEKTLALVRKCKNQGSVGVLKHVLTIRSTGDFRKVWNLLESSNGDMMWLLSIFESRGTNISLSPITSNDPILAWVWTYIYNLQLGNPNDRAEAATELGSLAQITDRNRFIIMEEGGVLPLLKVLKDSAFPDCQVAAANALANVVSDDQQKIVGFLLNNLAVPVIVQVLSDAVFRVRVSVANLVSAMADQEPLAREEFIRANVTKPLVSMLSIDNVLAEPVVARNSIHSVVQNLSEADSDGSSSRGREADQSPELRNAVKVSCAKALWKLSKGCLLACKKITETKGLLCLATIIGSESGELRLNCLMAVMEIAAMAESNVEFRRGALKSTAPAAKAVLNQLLRVVRQENDSLLLIPAIKSIGSLARNFPGKVPHVLGPLVTHLGNKDLNVASEVIVALVKFVCVENYNRVDHSMVILDLDGIPKLMILLKKNGRQQVYGLKLLCYFALNVGNSKVLEQERVLSTLDKLGHLVLAQNPDLKELFANAIHHLTLYQPGVQFHRQPLGYGL 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02915 591 MobiDBLite consensus disorder prediction 317 336 - -
Trre15g02915 591 PANTHER ARMADILLO REPEAT ONLY 4 13 577 - -
Trre15g02915 591 SUPERFAMILY ARM repeat 166 576 IPR016024 -
Trre15g02915 591 Coils Coil 78 98 - -
Trre15g02915 591 Gene3D - 20 136 IPR036537 GO:0007166
Trre15g02915 591 Gene3D - 159 333 IPR011989 -
Trre15g02915 591 Gene3D - 334 575 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02915 Trre-Chr15 25504336 25506111 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02915 - - psat:127073966 838.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02915 15 25504336 25506111 Trre15g02915 15 25504336 25506111 ECH
Trre15g02915 15 25504336 25506111 Trre5g02739 5 21839351 21845675 PCT