Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02851 ATGAACAACCCATCCACGAGGAATTCCGATTCCTCGTCTCACTTGGACTCTCCTCACTCTCCTCTCCGATTCCGATCTTCTCCACTATCAGACGGCGGCGATCCTTTCCACTCCACCGAAAACTCGCCGGAAACTGACCACCGAGATAACTCCAGAGCAATCATAATAATCGATCCTTCAATACAACACTCTCAAACATCAGCCACCGTACCGGATTCAGAGCACCGGAACCCACCGGCAAATGATCAACCGGCTGTTGTAGTCAACAGAACCATAAAAAATGATCCTCCGCTTACCACAACGAATATGGGACCCACGGTCACGGGAACAGGCCGTGAAGACGGCGGTGGCAGGGGAAGAACAAGGACAACGGCGGCAACACCGGCGTGGTCGAAAAGTGATGTGATGACGGGGAAGGTTGCATTAGGGTTCCGGTTAAGTGAGGTAGTGCTATGTCTGATTTCGTTTTCTGTTATGGCTGCGGATAAGACTCAAGGTTGGAGTGGTGATTCCTTTGATCGCTACAAAGAATACAGGTATTGTTTGTCTATGACGGTTATTGGTTTTGTATATGCGGGATTTCAAGCAGGTGAACTTGCCTATCAAATTATCAGGGGAAAACACATAATCAATCACCACCTGCGTTTTCATTTTGATTTCTTCATGGATCAGGTTCTGGCATATCTTCTAATATCATCGGCATCATCAGCAGCCACCCGAGTTGATGATTGGCAATCAAATTGGGGGAAAGATGAATTCACAGAGATGGCTAGTGCTTCTGTTGCATTAGCCTTTCTTGCTTTTATTGCCTTTGCTATTAGCTCACTTATCTCCGGTTACAACCTCTGTAATCGCTACCCTTAG 864 0.4699 MNNPSTRNSDSSSHLDSPHSPLRFRSSPLSDGGDPFHSTENSPETDHRDNSRAIIIIDPSIQHSQTSATVPDSEHRNPPANDQPAVVVNRTIKNDPPLTTTNMGPTVTGTGREDGGGRGRTRTTAATPAWSKSDVMTGKVALGFRLSEVVLCLISFSVMAADKTQGWSGDSFDRYKEYRYCLSMTVIGFVYAGFQAGELAYQIIRGKHIINHHLRFHFDFFMDQVLAYLLISSASSAATRVDDWQSNWGKDEFTEMASASVALAFLAFIAFAISSLISGYNLCNRYP 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02851 287 PANTHER CASP-LIKE PROTEIN 4A4 111 283 - -
Trre15g02851 287 Pfam Casparian strip membrane protein domain 139 270 IPR006702 -
Trre15g02851 287 MobiDBLite consensus disorder prediction 93 108 - -
Trre15g02851 287 MobiDBLite consensus disorder prediction 1 129 - -
Trre15g02851 287 MobiDBLite consensus disorder prediction 57 76 - -
Trre15g02851 287 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02851 Trre-Chr15 24663497 24665215 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02851 - - gmx:100812568 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02851 15 24663497 24665215 Trre5g02675 5 21070841 21072670 ECH
Trre15g02851 15 24663497 24665215 Trre15g02851 15 24663497 24665215 ECH
Trre15g02851 15 24663497 24665215 Trre5g02675 5 21070841 21072670 PCT