Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01362 ATGGCTTCTTCGGAAGCCGATTCCCGTCTGAGTCAGCTCGTTGTTCCTGCACTCGACAAGATCATTAAGAACGCTTCGTGGCGAAAGCATGCGAAGCTCGCTCACGAGTGCAAATCCGTCATCGAGAGGCTCAGTCTCAACAATCACCAGTTACCACCTGATTCTCCCTCCGATACCGAACCGGAAACGCCCGGTCCGCTTCACGACGGTGGTCCGGTTGAGTACTCACTCGCTGAGTCGGAATCGATTCTCACTCCTCTCATCAATGCCGCAGGTTCCGGTGTCCTCAAGATCGCTGATCCCGCTGTTGACGCTATTCAGAAACTAATCGCACATGGATACCTCCGTGGCGAAGCAGATCCCGGCGGTACTTCCGGCGAGGCAAAGTTACTTTCGAACATGATCGAATCGGTTTGCAAATGCCACGATTTCGGTGATGATGGGATGGAATTGCTGGTGCTGAAAACGCTCTTATCAGCGGTAACTTCAATTTCTCTTCGAATTCACGGTGATTGTTTGCTTCTGATAGTTAGAACGTGTTACGATATATATCTTGTGAGTAAGAATATGGTGAATCAAACTACGGCGAAGGCGTCATTGATTCAAATGTTAGTGATTGTGTTTAGGAGAATGGAAGCAGATTCTTCCACGGTTCCGATTCAGCCAATTGTGGTGGCTGAATTGATGGCGCCGGTGGAAAAATCTGAAGTTGACAGTTCAATGACGCTGTTTGTGCAAGGTTTTATTACAAAGATAATGCAGGACATTGATGGAGTTTTGAATCCAGTTACACCTAGTGGTAAGGTTTCATTGTTAGGAGGACATGATGGTGCATTTGAAACCACCACGGTGGAGACCACGAATCCTACTGATTTGTTGGATTCTACTGATAAGGACATGTTAGATGCTAAGTATTGGGAGATCAGTATGTATAAGACCGCGTTGGAAGGAAGGAAAGGGGAGTTGGTTGATGGGGAGTTGGTGGAGAGGGATGATGATTTGGAAGTTCAGATTGGGAACAAATTGAGGAGGGATGCTTTTTTAGTGTTTAGGGCGCTTTGTAAATTGTCCATGAAGACACCACCTAAGGAGGCGTCCGCGGATCCACAGTTGATGAAGGGGAAGATTGTGGCTTTAGAGTTGTTGAAGATTTTGCTAGAGAATGCTGGAGCTGTCTTCAGGACTAGTGACAGGTTCTTAGGTGCCATCAAGCAGTACTTATGTTTATCATTATTGAAGAACAGTGCTTCAACTCTTTTGATTGTTTTTCAGCTGTCATGCTCCATTTTCATCAGCTTGGTATCAAGATTTAGGGCTGGATTGAAAGCAGAAATTGGAGTTTTTTTCCCTATGATTGTTCTTAGGGTCCTAGAAAATGTTTCTCAACCTAATTTTCAGCAGAAGATGATTGTGCTTCGATTTCTAAAGAAGCTTTGTGTTGATTCACAAATATTGGTTGACATTTTTATCAACTATGACTGTGATGTTAATTCATCTAACATATTTGAGAGGATGGTTAACGGACTTCTTAAAACTGCTCAAGGTGTTCCTCCTGGTGTTACAACCACACTTTTGCCACCTCAAGAAGCAACACTAAAACTTGAAGCCATGAAATGCTTGGTTGATGTTCTAAAATCAATGGGAGACTGGATGAACAAACAATTGCGGATTCCAGATCCTCATTCAGCCAAGAAAGTTGAAACAGCTGATAATAGCTATGACACTGGAGGTTCCGCGATGGCAAATGGAAATGGAGTAGACCCAGTTGAAGGATCTGATCCTCATTCTGAAATCCCAAACGATACATCTGATGTTTCAACTATTGAGCAACACCGGGCTTATAAACTGGAACTTCAGGAAGGTATTACACTTTTTAATAGGAAGCCTAAGAAAGGAATTGAGTTTCTCATCAATGGCAACAAGGTGGGTGATTCACCAGAAGATATAGCTACTTTTCTTAAAGATGCATCTGGGTTGGACAAAACTTTGATTGGTGATTATCTGGGTGAAAGAGAAGAATTATCCTTGAAGGTAATGCATGCCTATGTGGATTCCTTTAACTTTCAAGGGATGGAGTTTGACGAGGCAGTCAGAGTCTTTCTTCAAGGATTTAGACTACCTGGTGAGGCACAAAAGATTGATCGGATAATGGAAAAGTTTGCTGAACGTTATTGGAAATGTAATCCTAAGGCTTTTTCCAGTGCTGACACAGCATATGTTCTTGCCTATTCTGTGATAATGCTCAATACAGATGCCCACAATCCTATGGTGAAGGACAAGATGTCTGCTGATGATTTCATCAGAAACAATCGTGGCATTGATGATGGAAAAGATCTGCCTGAGGAATACCTGAAGTCCTTGTTTGATCGAATATCTAGAAATGAAATCAAAATGAAAGAAAATGATATGACTGCCCAACAAAGGCAGGCTGTGAACCCAAATAAACTTTTAGGCTTGGATAGTATATTGAATATTGTGGTCCGTAAGCGTGATGAGAGTCAAATGGAAACCAGTGATGATCTTATCCGTCATATGCAAGAACAATTCAAAGAAAAAGCTCGCAAAACTGAGTCAGTTTATTATGCAGCGACAGATGCTGTAATTCTCAGATTCATGATAGAGGTGTGTTGGGCACCAATGTTAGCTGCTTTCAGTGTAGCTCTTGATCAAAGTGATGATGAGATTGTAATATGTCTGTGTCTTGAAGGCTTCCGCTATGCTATTCATGTTACTTCTGTAATGTCTATGAAGACTCATAGAGATGCTTTTGTGACTTCATTAGCAAAGTTTACTTCTCTGCATTCTCCAGCAGATATTAAACAAAAGAATGTATATGCAATTAAGGAAATAATTACTATTGCTGATGAGGATGGGAATTACTTGCAAGAAGCTTGGGAGCATATCTTGACTTGTGTTTCCCGATTTGAGCATCTACATCTTCTTGGAGAGGGTGCTCCACCAGATGCTACCTTTTTTTCCTTTCCTCAGAATGATTTGGAAAAAACAAAGCAAGCTAAATCAACCATTCTTCCTGTTTTAAAGAAGAAGGGACCTGGGAAGATGCTGTATGCAGCTGGAACATTGATGCGGGGTTCATACGATAGTGCTGGAATTGGCAGTAATGCTGGAGCAGTCACACCAGAACAGGTTAATAACCTGGTTTCAAATTTCAATATGTTGGAACAAGTTGGAAGCTCTGAAATGAATCGCATATTCACTCGGAGTCAGAAGTTGAACAGTGAGGCCATAATAGATTTTGTCAAGGCTCTATGCAAAGTCTCTATGGAGGAACTAAGATCTCCATCTGATCCACGTGTTTTCAGCCTTACAAAGATGGTTGAGATTGCGCACTATAATATGAACCGCATTCGGCTTGTGTGGTCAAGCATCTGGCATGTTCTCTCTGATTTTTTGGTAACCATTGGATGTTCTGCAAACCTTTCAATTGCAATTTTTGCAATGGATTCCTTGCGGCAGTTATCAATGAAATTTCTGGAGCGGGAAGAGTTGGCCAATTATAATTTTCAAAATGAATTCATGAAGCCTTTTGTCATTGTTATGCGAAAGAGTAATGCTGTTGAAATTAGAGAACTAATTATCAGATGCGTATCTCAAATGGTTCTATCTCGTGTCAACAATGTCAAGTCGGGGTGGAAGAGCATGTTCATGGTATTCACTACAGCAGCTTATGATGACCACAAAAACATTGTACTCTTGGCTTTTGAAATTATTGAGAAGATTATTCGAGATTACTTTCCATACATTACTGAGACTGAAACCACCACCTTCACAGACTGTGTTAATTGTCTAATTGCATTCACAAATAGTAGATTCAACCAAGAGATTAGCCTAAATGCTATTGGTTTTCTTTCTTTCTGTGCAACAAAACTAGCTGGAGGAGATCTTGGCTCATCATCCAGGAATAAAGATAAGGAAGTTTCAGGGAAGATTTCCTCACCTTCACCTCAAGAAGGAAAAGATGGGAATCAATTTAAAGGAGAGGTGACCGACAAGGATGATCATCTCAATTTCTGGTTTCCTCTACTGTCAGGTCTGTCTGAACTTAGCTTTGACCCAAGGCCCGAGGTTAGGAAGAGTGCCCTGGATGTCCTGTTTGAAACCTTACGTAACCATGGCCATCTCTTTTCGCTACCTTTATGGGAAAGAATATTTGAGTCTGTCCTCTTTCCTATATTTGATTATGTTCGACATGCTATTGATCCTTCAGGGAGTAGTGCACAGGTCAATGAAGTAGAGACTAGTGGTGAGCTTGATCAAAGTTGGCTTTATGAGACATGCACGGTGGCCCTCCAACTGGTTGTAGATCTTTTTGTCAACTTTTACAACACAGTCAATCCTCTTTTAAGAAAGGTCCTGATGCTCCTAGTAAGCTTCATAAAGCGCCTTCATCAAAGCCTCGCTGGCATAGGTATTGCTGCATTTGTTCGATTGATGAGTAATGCTGGAGAGCTATTTTCTGATGACAAGTGGTTAGAAGTGGTTTTGTCGATTAAAGAAGCAGCAAATGAAACACTCCCTAAATTTTCATTCCTCGAGAGTGAAGACTTTGTGGCTAGAAATGAAGAACATGCTTCAACAGTTAATTTAGAGTTTGGGTCACCAGATGATTTAGAAAGCCTAAGTGCTCGTCGTCTCTATGTTTGTTTCACCAATGCAAAAGGCCGAGCAGCTGTTCAGCTTTTATTGATTCAGGCTGTGATGGAGGTCTACACCATGTTTCGGTCTCGCCTTTCAGCTAAAACCATGCTAGTCCTATTTGATGCTTTGCATGGTGTAGCATTACATGCCCATAACATAAACAACAATGCTATATTGCGTTCCAAGCTTCAAGAGTTTGGTTCTATGATCCAAATGCAAGATCCTCCATTGTTACGTCTTGAAAATGAGTCTTACCAAACATGCCTTACATTTTTAGAGAATCTTGTTGTTGACAAGCCTCCTAGTTATGAGGAAGCAGAGGCGGAATCTCATCTTGTTCGGCTTTGTCAGGAGGTTTTGGAGTTTTATATTAAAGTTGCAGATTGTGAAGAAAAATCGGAATCTTCTCATAGGATAAAAACACATTGGTCAATTCCTGTAGGCTCTGTGAAGCGGAGAGAATTAGCTGCACGCTCGCCTCTTGTTGTGGCTACTCTGCAAGCTATTTGTAGCTTGGATGATATTTCTTTTGAGAAGAATCTGTCTCATTTTTTCCCTCTGCTCTCTAGCTTGGTAAGTTGTGAACATGGTTCAAATGACGTCCAAGTTGCCCTTTGTGATATGCTTAGTTTATCAGTTGGTCCTGTTTTGTTACGATCATGTTGA 5325 0.4135 MASSEADSRLSQLVVPALDKIIKNASWRKHAKLAHECKSVIERLSLNNHQLPPDSPSDTEPETPGPLHDGGPVEYSLAESESILTPLINAAGSGVLKIADPAVDAIQKLIAHGYLRGEADPGGTSGEAKLLSNMIESVCKCHDFGDDGMELLVLKTLLSAVTSISLRIHGDCLLLIVRTCYDIYLVSKNMVNQTTAKASLIQMLVIVFRRMEADSSTVPIQPIVVAELMAPVEKSEVDSSMTLFVQGFITKIMQDIDGVLNPVTPSGKVSLLGGHDGAFETTTVETTNPTDLLDSTDKDMLDAKYWEISMYKTALEGRKGELVDGELVERDDDLEVQIGNKLRRDAFLVFRALCKLSMKTPPKEASADPQLMKGKIVALELLKILLENAGAVFRTSDRFLGAIKQYLCLSLLKNSASTLLIVFQLSCSIFISLVSRFRAGLKAEIGVFFPMIVLRVLENVSQPNFQQKMIVLRFLKKLCVDSQILVDIFINYDCDVNSSNIFERMVNGLLKTAQGVPPGVTTTLLPPQEATLKLEAMKCLVDVLKSMGDWMNKQLRIPDPHSAKKVETADNSYDTGGSAMANGNGVDPVEGSDPHSEIPNDTSDVSTIEQHRAYKLELQEGITLFNRKPKKGIEFLINGNKVGDSPEDIATFLKDASGLDKTLIGDYLGEREELSLKVMHAYVDSFNFQGMEFDEAVRVFLQGFRLPGEAQKIDRIMEKFAERYWKCNPKAFSSADTAYVLAYSVIMLNTDAHNPMVKDKMSADDFIRNNRGIDDGKDLPEEYLKSLFDRISRNEIKMKENDMTAQQRQAVNPNKLLGLDSILNIVVRKRDESQMETSDDLIRHMQEQFKEKARKTESVYYAATDAVILRFMIEVCWAPMLAAFSVALDQSDDEIVICLCLEGFRYAIHVTSVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNVYAIKEIITIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFSFPQNDLEKTKQAKSTILPVLKKKGPGKMLYAAGTLMRGSYDSAGIGSNAGAVTPEQVNNLVSNFNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELRSPSDPRVFSLTKMVEIAHYNMNRIRLVWSSIWHVLSDFLVTIGCSANLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSNAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFNQEISLNAIGFLSFCATKLAGGDLGSSSRNKDKEVSGKISSPSPQEGKDGNQFKGEVTDKDDHLNFWFPLLSGLSELSFDPRPEVRKSALDVLFETLRNHGHLFSLPLWERIFESVLFPIFDYVRHAIDPSGSSAQVNEVETSGELDQSWLYETCTVALQLVVDLFVNFYNTVNPLLRKVLMLLVSFIKRLHQSLAGIGIAAFVRLMSNAGELFSDDKWLEVVLSIKEAANETLPKFSFLESEDFVARNEEHASTVNLEFGSPDDLESLSARRLYVCFTNAKGRAAVQLLLIQAVMEVYTMFRSRLSAKTMLVLFDALHGVALHAHNINNNAILRSKLQEFGSMIQMQDPPLLRLENESYQTCLTFLENLVVDKPPSYEEAEAESHLVRLCQEVLEFYIKVADCEEKSESSHRIKTHWSIPVGSVKRRELAARSPLVVATLQAICSLDDISFEKNLSHFFPLLSSLVSCEHGSNDVQVALCDMLSLSVGPVLLRSC 1774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01362 1774 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 58 1639 - -
Trre15g01362 1774 MobiDBLite consensus disorder prediction 1302 1332 - -
Trre15g01362 1774 ProSiteProfiles SEC7 domain profile. 607 794 IPR000904 GO:0005085|GO:0032012
Trre15g01362 1774 Gene3D - 689 809 IPR023394 -
Trre15g01362 1774 MobiDBLite consensus disorder prediction 47 72 - -
Trre15g01362 1774 MobiDBLite consensus disorder prediction 562 605 - -
Trre15g01362 1774 Pfam Sec7 domain 615 796 IPR000904 GO:0005085|GO:0032012
Trre15g01362 1774 SUPERFAMILY ARM repeat 402 1507 IPR016024 -
Trre15g01362 1774 CDD Sec7 614 796 IPR000904 GO:0005085|GO:0032012
Trre15g01362 1774 Pfam BIG2 C-terminal domain 1565 1762 IPR046455 -
Trre15g01362 1774 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 343 501 IPR032691 -
Trre15g01362 1774 FunFam Brefeldin A-inhibited guanine nucleotide-exchange 1 689 807 - -
Trre15g01362 1774 SUPERFAMILY Sec7 domain 611 802 IPR035999 GO:0005085|GO:0032012
Trre15g01362 1774 SMART sec7_5 611 796 IPR000904 GO:0005085|GO:0032012
Trre15g01362 1774 Pfam Domain of unknown function (DUF1981) 1163 1245 IPR015403 -
Trre15g01362 1774 Pfam Dimerisation and cyclophilin-binding domain of Mon2 6 214 IPR032629 -
Trre15g01362 1774 Pfam C-terminal region of Mon2 protein 1341 1424 IPR032817 -
Trre15g01362 1774 Gene3D - 607 688 - -
Trre15g01362 1774 FunFam Brefeldin A-inhibited guanine nucleotide-exchange protein 1 599 687 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01362 Trre-Chr15 10598583 10609468 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01362 K18442 - gmx:100778814 3055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g01933 13 16496446 16506529 Trre15g01362 15 10598583 10609468 PCT