Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre15g01243 | ATGTCTTCCTTTATTGCCCTTCAAAGCTTTCATGGCTCTCTTCTTAGATCAAAGTTCTTAGGCCAAGACAGCCTAACTCATCTTTATCCTAAGGCTCCAACCATTCACAGCAAACCAACCTACAAAAGAATACAACCATGCGCCAAATTCGACTTACTGCAAATCATGGGAGGCCGAGGACTTTGCAAAGGAGAAGAAGGTCTTCAAAAAGAGCTTAAAAGAGAAGTTGGTTTCGACGATCAGAACCAACCATTACCATCAGAAGCAGGTGACAACGATCAAGAAAACTCAACGCAATCCGTTGAAAGTGTTGCTGAAGATGGTTTCGATAAAGAGTTAATGGGGTTAACCGGAGGGTTTCCTGGTGGTGAAAAAGGGTTGAGAAAATTCATCGAAGAAAACCCTCCTCCGAAGAAACCTGATGCTGATGACAAAAGACTTAAACTTTCATCCTCATCATCGAAACCGAAACCACCAGAACTTCCTATGTTACTTCCAGGAATGATTGCTATTGTGAAAAATGAAAATAACCCTTTTTACATGTACTGTGGTATTGTTCAAAGAATCACTGATGGAAAGGCTGGAGTACTCTTTGAAGGAGGGAATTGGGATAAGTTGATCACTTTCAGGCTTGAAGAATTGGAGAGAAGAGAAAAAGGTCCTCCTATGAAGAATCCTAAGTCTTGTGTTCTTGAACCATTTCTTGTAAAAAAGTCATAG | 720 | 0.4056 | MSSFIALQSFHGSLLRSKFLGQDSLTHLYPKAPTIHSKPTYKRIQPCAKFDLLQIMGGRGLCKGEEGLQKELKREVGFDDQNQPLPSEAGDNDQENSTQSVESVAEDGFDKELMGLTGGFPGGEKGLRKFIEENPPPKKPDADDKRLKLSSSSSKPKPPELPMLLPGMIAIVKNENNPFYMYCGIVQRITDGKAGVLFEGGNWDKLITFRLEELERREKGPPMKNPKSCVLEPFLVKKS | 239 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre15g01243 | 239 | PANTHER | NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT S, CHLOROPLASTIC | 1 | 238 | IPR021659 | GO:0009767 | |
| Trre15g01243 | 239 | MobiDBLite | consensus disorder prediction | 126 | 151 | - | - | |
| Trre15g01243 | 239 | MobiDBLite | consensus disorder prediction | 75 | 162 | - | - | |
| Trre15g01243 | 239 | Gene3D | - | 159 | 228 | - | - | |
| Trre15g01243 | 239 | MobiDBLite | consensus disorder prediction | 85 | 104 | - | - | |
| Trre15g01243 | 239 | Pfam | NAD(P)H dehydrogenase subunit S | 164 | 215 | IPR021659 | GO:0009767 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trre15g01243 | Trre-Chr15 | 9584165 | 9584884 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre15g01243 | K00345 | - | gmx:100527145 | 322.013 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Trre13g02032 | 13 | 17566806 | 17567297 | Trre15g01243 | 15 | 9584165 | 9584884 | PCT |