Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre13g02032 | ATGGTTGTTTTTGCCACTCTTCAAGGCACTCTTCTACGATCCAAATTCCTAGGCCATGATAATCACTTCCCTCTCATAAAAACTCCAACAAAACATAAAAGAAAACCAACTTATCAACCACAACCACGTGCTGAGTTCAACATACTAAAAATTATGGGAGGAAGAGGATTATGCAATGGAGAAAAAGGACTTGAACAAGAGCTTAAAAGGAAGGTTGATAAAGAGGAAACAACATCATCCAATGAAAAGGTGCAAGAAAAATCAAATGAGTCAGAAAAGTTGACTAGTGATGATATTGATGAAATAGAAATACCAAAAGATGGTTTTGAGAAGGAAATGATGGGACTAACTGGAGGGTTTCCTGGTGGTGAAAAAGGTTTGATAAAGTTCATTCAAGAAAATCCACCTAGGGGTAGGAATTCTTCTTCTCATGACCTTATCATTGTGAAAGAAAGTAATCAAAGCCTTCTTGAAGAATCCAAAACATCATAG | 492 | 0.3638 | MVVFATLQGTLLRSKFLGHDNHFPLIKTPTKHKRKPTYQPQPRAEFNILKIMGGRGLCNGEKGLEQELKRKVDKEETTSSNEKVQEKSNESEKLTSDDIDEIEIPKDGFEKEMMGLTGGFPGGEKGLIKFIQENPPRGRNSSSHDLIIVKESNQSLLEESKTS | 163 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre13g02032 | 163 | PANTHER | NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT S, CHLOROPLASTIC | 4 | 147 | IPR021659 | GO:0009767 | |
| Trre13g02032 | 163 | MobiDBLite | consensus disorder prediction | 68 | 99 | - | - | |
| Trre13g02032 | 163 | MobiDBLite | consensus disorder prediction | 135 | 163 | - | - | |
| Trre13g02032 | 163 | MobiDBLite | consensus disorder prediction | 132 | 163 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trre13g02032 | Trre-Chr13 | 17566806 | 17567297 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre13g02032 | K00345 | - | psat:127127128 | 195.282 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Trre13g02032 | 13 | 17566806 | 17567297 | Trre15g01243 | 15 | 9584165 | 9584884 | PCT |